Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01863 ATGACTGTTCAGAGGAAAAGCGTGTTGGTTGGGATTAAAATCGATAGCCAAAGCAGGCAGCTTCTAAATTGGGCTCTTGTCAAAGTTGCTCAACCTGGAGATTGTGTTGTTGCAGTTCATGTGGTCAAATGTCCAGGACATGTTTCAAAAAACAAGCCCCTTCTGGATAATTATTTAGAGGTTTATGATGGCCTATGTGACGTGAAAAAAGTAAGTCTCGTAGGTCAAATCTTCAAAGGGAGATCCGTTCGAAACATTCTTGTGAGAGAGTCAAAGAACAATTCTGCTCTGGCTCTAGTGGTTGGTGGTGGTACTGCCACAGCTAAATATTGCGCCAAACGACTCTCACCCACCACAGATGTTGTGGCCCTCCAGGATGGAAGAATTGTCTTTAGAAGGTGTACCAATCTTAGACTACCAGTACCAGGTCTTATACAAGATCCAAGGCCTAGTCTCACAAGCATGAACGACAAAGAAATCCTGTCTGAATATGCAGACTCCGAGGTTGGAACTATGAAATCAATATGTTGTGAGGAGACAAGAGAAGATGTCCCAGAATTGAAACAAGTATCTGACGATATTGAAGGGAGCAAGAAAGTGTGTTCAAGAGCAATATCTCTGTTTGTAGGTGACCCTTGTGAGCAGAAACTAGGATGGCCCTTGCTCCGGAGAGTTAATTCAGAGATATCAGAGCCAGAGACACCTCTTGCAAGGAACTTGTCTGTAGTACAATGGGTAATGAACTTACCAGATCGTTCTCCAGAGAGAATTTCTTGCTTTTCATCCACAGAAGAAAGTCCCTTAGGAAGAGGCATAAGTGATTTTGAGGATGACAGACAGAAAAACAGTTCATGTTCTTCATCTTTTGAGCTACCCAAGGAATTGGAGGGGATTTTGCACTTGAATTTATTTGATTGCAAGTGGTTTAACTATGAGGATCTCAAGTCCTGGACTTCTCAATTCTCTTCAGGAAATTTGATTGGGAAAGGAGGGAGTAACCGTGTGTATAAAGGGATTCTCCCTGATGGAAAACCAATTGCAGTCAAAGTTTTACAATCATCAAAAGTGGCTTGTAAAGATTTTGCACAGGAAGTGGAAATAATATCCTCTTTGAAGCATAGATACATAACCTCTTTGCTTGGAATATGCATCTCAGAAAATGCTTTAATCTCTGTCTATGAGTTTTTCCCCAAGGGAAGCTTGGGGGAAAACTTACACGGTGAGAGCAAGGATGGATCCATGTTGTCATGGCAAGTGAGATTCAATATGGCTGTTGGTATAGCAGAAGCCCTCAATTACCTTCATAACGAAACTTCAAAGCCTGTCATACACAGAGATGTCAAGTCGTCAAATATTCTTCTCTCCCATGGCTTTGAACCACAATTGACTGATTTTGGACTTGCAATTTGGGGACCAACAAGTTCATACTTTCTGACACAAGAAGATGTAGTAGGAACATTCGGATATCTTGCTCCCGAATACTTCATGTATGGAAAAATAAGTGACAAGATAGATGTGTACGCATTTGGTGTAGTACTTCTTGAACTAATCTCAGGAAGGGAACCAATCAATTCCGATATTTGCAAAGGAAAACAAAGTTTGGTTGCGTGGGCAAAACCAATAATAGAGAGTGGGAATGTTAAAGGCTTAATGGACTCCAATTTAGAAGGGAATTTTGATGAGGTCCAAATGCAAAGAATGGTCAAGGCAGCAAATCTATGCATTACAAGGGCTGCTAGGCTTCGTCCCAACATTAACCAGATACTGAAGATCCTGCAAGGAGAAGAAAGAGATGACAGTTTTATGAGCTCATCTCTACGGTTTGATGATAATAATGAGAATACAGAAAACCAGGAGAACATAGACGATGAAGTGTATCCAAATTCAAGTGCAGAGTTACACCTAAGTCTGGCATTACTTGATGTTGTTGACGACCATTCTCCATCGCATAGCAGTAGTACAGGGCGGAGCAACAGTCTTTCTTTGGAAGAACACTTGAAAGAAAGATGGAGCAGATCATCCAGTTTTGATTAG 2034 0.412 MTVQRKSVLVGIKIDSQSRQLLNWALVKVAQPGDCVVAVHVVKCPGHVSKNKPLLDNYLEVYDGLCDVKKVSLVGQIFKGRSVRNILVRESKNNSALALVVGGGTATAKYCAKRLSPTTDVVALQDGRIVFRRCTNLRLPVPGLIQDPRPSLTSMNDKEILSEYADSEVGTMKSICCEETREDVPELKQVSDDIEGSKKVCSRAISLFVGDPCEQKLGWPLLRRVNSEISEPETPLARNLSVVQWVMNLPDRSPERISCFSSTEESPLGRGISDFEDDRQKNSSCSSSFELPKELEGILHLNLFDCKWFNYEDLKSWTSQFSSGNLIGKGGSNRVYKGILPDGKPIAVKVLQSSKVACKDFAQEVEIISSLKHRYITSLLGICISENALISVYEFFPKGSLGENLHGESKDGSMLSWQVRFNMAVGIAEALNYLHNETSKPVIHRDVKSSNILLSHGFEPQLTDFGLAIWGPTSSYFLTQEDVVGTFGYLAPEYFMYGKISDKIDVYAFGVVLLELISGREPINSDICKGKQSLVAWAKPIIESGNVKGLMDSNLEGNFDEVQMQRMVKAANLCITRAARLRPNINQILKILQGEERDDSFMSSSLRFDDNNENTENQENIDDEVYPNSSAELHLSLALLDVVDDHSPSHSSSTGRSNSLSLEEHLKERWSRSSSFD 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01863 677 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 290 395 - -
Accr1g01863 677 Gene3D Transferase(Phosphotransferase) domain 1 396 606 - -
Accr1g01863 677 MobiDBLite consensus disorder prediction 661 677 - -
Accr1g01863 677 PANTHER OS08G0249100 PROTEIN 197 620 IPR046958 -
Accr1g01863 677 Pfam Protein kinase domain 323 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01863 677 Gene3D Phosphorylase Kinase; domain 1 292 395 - -
Accr1g01863 677 ProSiteProfiles Protein kinase domain profile. 321 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01863 677 SUPERFAMILY Protein kinase-like (PK-like) 303 592 IPR011009 -
Accr1g01863 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Accr1g01863 677 MobiDBLite consensus disorder prediction 602 623 - -
Accr1g01863 677 MobiDBLite consensus disorder prediction 646 660 - -
Accr1g01863 677 MobiDBLite consensus disorder prediction 644 677 - -
Accr1g01863 677 FunFam Putative receptor-like serine/threonine-protein kinase 396 607 - -
Accr1g01863 677 SMART serkin_6 321 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01863 677 CDD USP_Like 8 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01863 Accr-Chr1 49116302 49119404 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01863 308 592 Trihelix Transcription Factor Family AT5G38560 42.662 8.12e-71 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Accr1g01863 Pkinase 2.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01863 - - gmx:100789189 826.624