Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01857 ATGGGAAGGTCCCCTTGTTGTGAGAAAGCCCACACCAACAAAGGTGCTTGGACCAAAGAGGAAGATGATCGCCTCATCGCTTACATCCGCGCCCACGGCGAGGGCTGCTGGCGCTCCCTCCCTAAAGCCGCCGGCCTCCTCCGCTGCGGCAAGAGCTGCCGCCTCCGCTGGATCAACTACCTCCGCCCCGACCTCAAACGCGGCAACTTCACCGAAGAAGAAGACGAGCTCATCATCAAACTCCACAGCCTTCTCGGCAACAAGTGGTCTTTAATTGCCGGAAGATTGCCGGGAAGAACGGACAATGAGATAAAGAATTACTGGAACACCCACATCAGAAGGAAGCTTTTAAACAGAGGAATCGACCCTTCCACTCACCGTCCTCTGAATGACTCCACCAATTCTGCCCAGAACAATCAAGAAGCCACCACCACTATCTCTTTCGCCTCCCATGTGAAACAAGAGACCGATACTAATAATAATGACAACAAGGCAAACGTGTTCGTTGAGCTTCACAGAGATTCAAAACGGGGCGTGGCAAGAGAACGATGCCCTGACCTCAACCTTGAGCTCACCATTAGTCCTCCTCATCAAAACCAGGAAACAGAGGATCAAGTCATACTCAAGACTGGTGGAGGAGGAAGAAGCCTCTGTTTTGCTTGCAGTTTGGGGTTGCAGAATAGCAAGGATTGTAGCTGCGGAATTGTTGGCACCATTAATGGCGGCACAAGCGGGAGTGGTAGTAGCGCTGGTGGTTATGATTTCTTGGGGTTGAAAAGCTCTGTTTTGGTTTAG 795 0.5145 MGRSPCCEKAHTNKGAWTKEEDDRLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRGIDPSTHRPLNDSTNSAQNNQEATTTISFASHVKQETDTNNNDNKANVFVELHRDSKRGVARERCPDLNLELTISPPHQNQETEDQVILKTGGGGRSLCFACSLGLQNSKDCSCGIVGTINGGTSGSGSSAGGYDFLGLKSSVLV 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01857 264 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 178 - -
Accr1g01857 264 FunFam MYB-related transcription factor 13 66 - -
Accr1g01857 264 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Accr1g01857 264 CDD SANT 69 112 IPR001005 -
Accr1g01857 264 SMART sant 66 114 IPR001005 -
Accr1g01857 264 SMART sant 13 63 IPR001005 -
Accr1g01857 264 MobiDBLite consensus disorder prediction 120 140 - -
Accr1g01857 264 CDD SANT 16 61 IPR001005 -
Accr1g01857 264 Gene3D - 69 167 - -
Accr1g01857 264 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Accr1g01857 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Accr1g01857 264 FunFam Myb transcription factor 68 137 - -
Accr1g01857 264 Gene3D - 14 66 - -
Accr1g01857 264 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr1g01857 264 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr1g01857 264 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Accr1g01857 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Accr1g01857 264 MobiDBLite consensus disorder prediction 125 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01857 Accr-Chr1 48993092 48994043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01857 1 258 MYB Transcription Factor Family AT4G38620 60.440 4.02e-110 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr1g01857 Myb_DNA-binding 3.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01857 K09422 - zju:107404478 382.489