Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01848 ATGTCGAGCATCGCCAATGACATCCTGGCGAGCCCGATACAGATGGCGGACCAGGTGATCAAGCTGGCGGACGAAGCCCAAGCATCCAAGTTAGAATGTTTGGAGCTCAAGGTCAAAGCGGAGAAACTTGTGACCTTGCTCCGGCAAGCCGCCAGGGCCAGCAGTGACCTCTACGAGAGGCCAACACGGCGAATCATCGACGACGTCGAGCAAGTCCTCGAGAAGGCCCTCCAACTCATCGAAAAATGCTGCGGAAACGGCCTCATGAAACGACTCTTTACCATCATAACCCCGGCGGCGTTTCGCAAGACGTCCACGCAGCTCGATAATTCCCTCGGCGACGTACAATGGCTCCTCCGTGTATCTGTCCCTGCCGACCAGCGCGACGACGATTATCTGGGTGGGTTACCCCCAATCGCCTCCAACGAGCCCATCTTGTGCCTAATTTGGGAGCAGATAGCCATATTGCTCACAGGCTCTTCCATGGAAGATCGCTCTGACGCCGCCGCTTCCTTGGTCTCTCTGGCTCGAGACAACGACAGGTACAACAAATTGATTATTGAGGAGGGTGGAGTTCCACCACTATTGAAATTGCTGAAGGAAGGACATGTAGAGGGTCAGGAAAGTGCAGCGAGAGCGATTGGGTTACTTGGGAATGACCCTGAAAGTGTGGAACACATTGTGAATGCTGGGGTTTGCACAGTGTTTGCCAAAGTCCTCAAAGAAGGCGACATGAAGGTTCAGGCTATGGTGGCTTGGGCTATCTCCGAATTAGCATATCACCACCCAAAGTGTCAGGATCACTTTGCTCAGACAAATTGCATACGCCTGCTGGTAAGGCATCTTGCCTTTGAGACAATCCAGGAACACAGTAAGTACGCCATAACCAGTAAGCAAAACATGTCGTCCATCCACTCCGTCGTGATGGCCAGTAACGCTCAGAATCAGGATGATCACGACAAGAAGACTATGATGATGCATGAAGGTAACTATGTTCCTCGTCCTATGGGTAACCAGTCATCCAGCCAAATGAGTAATGTAGTCACCAACACAATGGCCGTGAACCACGGCCATGGCGGCCACGGTGGCGGCAATAACTCCTCGAAGCATGTTTCAATTGCGGGGACGAGTCTTAAGGGGAGGGAGGCTATGGATCCAGTTACAAAGGCCCAAATGAAGGCTATGGCAGCGAAAGCGCTGTGGCAACTCTCGAGGGGAAACGTCACTGTGTGTCACAGCATCACAGAATCAAAGGCTCTCTTATGTTTTGCTGTTCTGTTGGAGAAGGGACCTGATGATGTCAAATCCTTTTCAGCTTTTGCTTTAATGGAGATCACAGCAGTGGCAGAGCAACACGCAGAGTTGAGACGCTCTGCTTTCAAACCCAATTCCCCTGCTGCGAAAGCCGTGGTGGACCAGTTTGTTAGGATCATTTCAAAAATGGAATTTGATCTTCTCATACCTTGCATTAAATCAATAGGTAACTTGGCAAGGACTTTTAGAGCAACAGAAACAAGAATTATACCACCATTGGTGGCTCTGCTTGAAGAAGGAGTAGACGAGGATGTTAGAGTGGAATCCACAATTGCACTTGTCAAGTTTGCTTGTCCTGATAACTTTCTGCACCAGACACACTGCTCAGCCATAATAGAAGCAGGAGGACTACCTCACATAACTAACATGATTTTCTTGGCGGGGCTTGCCGGAAGGATTGCTGTGGCCCAGCTTCTGTGTTATGTGGTAGTACATGTTCCCAAAAGTGAGGCGCTTACCCAAGATCGTGAAGTTCTCAGAGCTCTGGAATGGTGCAAGGCGCCTGAACAACAGCTTATGCCAATTGTTGGAGAGCTTTTAGATGAAGCCTATGGTATATTAACACTGTATCAAACAAGAGATGCCACAAGAGGATTCCACAGTTATTGA 1923 0.4961 MSSIANDILASPIQMADQVIKLADEAQASKLECLELKVKAEKLVTLLRQAARASSDLYERPTRRIIDDVEQVLEKALQLIEKCCGNGLMKRLFTIITPAAFRKTSTQLDNSLGDVQWLLRVSVPADQRDDDYLGGLPPIASNEPILCLIWEQIAILLTGSSMEDRSDAAASLVSLARDNDRYNKLIIEEGGVPPLLKLLKEGHVEGQESAARAIGLLGNDPESVEHIVNAGVCTVFAKVLKEGDMKVQAMVAWAISELAYHHPKCQDHFAQTNCIRLLVRHLAFETIQEHSKYAITSKQNMSSIHSVVMASNAQNQDDHDKKTMMMHEGNYVPRPMGNQSSSQMSNVVTNTMAVNHGHGGHGGGNNSSKHVSIAGTSLKGREAMDPVTKAQMKAMAAKALWQLSRGNVTVCHSITESKALLCFAVLLEKGPDDVKSFSAFALMEITAVAEQHAELRRSAFKPNSPAAKAVVDQFVRIISKMEFDLLIPCIKSIGNLARTFRATETRIIPPLVALLEEGVDEDVRVESTIALVKFACPDNFLHQTHCSAIIEAGGLPHITNMIFLAGLAGRIAVAQLLCYVVVHVPKSEALTQDREVLRALEWCKAPEQQLMPIVGELLDEAYGILTLYQTRDATRGFHSY 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01848 640 Gene3D - 151 328 IPR011989 -
Accr1g01848 640 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 190 232 IPR000225 GO:0005515
Accr1g01848 640 Pfam Armadillo/beta-catenin-like repeat 185 215 IPR000225 GO:0005515
Accr1g01848 640 CDD MLKL_NTD 13 93 - -
Accr1g01848 640 PANTHER ARMADILLO REPEAT ONLY 4 1 631 - -
Accr1g01848 640 Gene3D - 387 607 IPR011989 -
Accr1g01848 640 SUPERFAMILY ARM repeat 151 596 IPR016024 -
Accr1g01848 640 FunFam Armadillo repeat only 2 151 322 - -
Accr1g01848 640 Gene3D - 5 121 IPR036537 GO:0007166
Accr1g01848 640 SMART arm_5 220 260 IPR000225 GO:0005515
Accr1g01848 640 SMART arm_5 178 219 IPR000225 GO:0005515
Accr1g01848 640 SMART arm_5 542 582 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01848 Accr-Chr1 48874456 48876519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01848 153 279 U-box Gene Family AT2G28830 33.582 4.03e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01848 - - qsa:O6P43_002104 815.839