Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01847 ATGGCTTCCTCTTCCCCTGCTTCTCTGTACGACGTGCTTGGGATCTCGATGGGTGCTAGCGGTAACGAGATTAAAGCAGCTTATAGGAAGCTTGCGAGGACGTGTCATCCTGATGTGGTGTCCATGAATCAGAAGGAAACCTCGGCCAACGAGTTCATGAAGATCCATTCGGCTTATTCCACGTTGTCGGATCCCAGCAAGAGAGCTCAATATGACAGACAGCTCCATGGCCATAGTCGTAGAAGCCCCCTTACTTCTTCAAACATAGCTTCTATGTCTGGGTATCGTCCTAGATATTCTCACTCTGGAATGAACTGGGAGACAGACCAGTGTTGGTAG 339 0.4926 MASSSPASLYDVLGISMGASGNEIKAAYRKLARTCHPDVVSMNQKETSANEFMKIHSAYSTLSDPSKRAQYDRQLHGHSRRSPLTSSNIASMSGYRPRYSHSGMNWETDQCW 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01847 112 CDD DnaJ 10 64 IPR001623 -
Accr1g01847 112 ProSiteProfiles dnaJ domain profile. 8 75 IPR001623 -
Accr1g01847 112 Gene3D DnaJ domain 2 93 IPR036869 -
Accr1g01847 112 PRINTS DnaJ domain signature 67 86 IPR001623 -
Accr1g01847 112 PRINTS DnaJ domain signature 10 28 IPR001623 -
Accr1g01847 112 PRINTS DnaJ domain signature 28 43 IPR001623 -
Accr1g01847 112 PRINTS DnaJ domain signature 47 67 IPR001623 -
Accr1g01847 112 ProSitePatterns Nt-dnaJ domain signature. 52 71 IPR018253 -
Accr1g01847 112 MobiDBLite consensus disorder prediction 80 95 - -
Accr1g01847 112 SMART dnaj_3 7 67 IPR001623 -
Accr1g01847 112 SUPERFAMILY Chaperone J-domain 6 78 IPR036869 -
Accr1g01847 112 Pfam DnaJ domain 9 72 IPR001623 -
Accr1g01847 112 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 3 89 - -
Accr1g01847 112 MobiDBLite consensus disorder prediction 63 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01847 Accr-Chr1 48857178 48857516 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01847 1 72 C2H2 Transcription Factor Family AT1G74250 43.038 1.07e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01847 - - pcin:129292702 203.756