Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01846 ATGTTTTCTTCTTCTAATTCCATCTTCCTCGTCCACTCTTTCTTTCCAGCCTCTCAGCTCAAAGCTTCTAGACCCAAGAAAGCTTATTTTCCAGGGAAAATCTCTGCCTCTTACACTGCAACTGAAAACAGAGTATTCACAAGCACCAACATGGCTTCCTCTTCCCCTGCTTCTCTGTACGACGTGCTTGGGATCTCGATGGGTGCTAGCGGTAACGAGATTAAAGCAGCTTATAGGAAGCTTGCGAGGACGTGTCATCCTGATGTGGTGTCCATGAATCAGAAGGAAACCTCGGCCAACGAGTTCATGAAGATCCATTCGGCTTATTCCACGTTGTCGGATCCCAGCAAGAGAGCTCAATATGACAGACAGCTCCATGGCCATAGTCGTAGAAGCCCCCTTACTTCTTCAAACATAGCTTCTATGTCTGGGTATCGTCCTAGATATTCTCACTCTGGAATGAACTGGGAGACAGACCAGTGTTGGTAG 489 0.4703 MFSSSNSIFLVHSFFPASQLKASRPKKAYFPGKISASYTATENRVFTSTNMASSSPASLYDVLGISMGASGNEIKAAYRKLARTCHPDVVSMNQKETSANEFMKIHSAYSTLSDPSKRAQYDRQLHGHSRRSPLTSSNIASMSGYRPRYSHSGMNWETDQCW 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01846 162 Pfam DnaJ domain 59 122 IPR001623 -
Accr1g01846 162 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 15 138 - -
Accr1g01846 162 CDD DnaJ 60 114 IPR001623 -
Accr1g01846 162 MobiDBLite consensus disorder prediction 113 142 - -
Accr1g01846 162 ProSitePatterns Nt-dnaJ domain signature. 102 121 IPR018253 -
Accr1g01846 162 ProSiteProfiles dnaJ domain profile. 58 125 IPR001623 -
Accr1g01846 162 Gene3D DnaJ domain 45 143 IPR036869 -
Accr1g01846 162 SMART dnaj_3 57 117 IPR001623 -
Accr1g01846 162 PRINTS DnaJ domain signature 78 93 IPR001623 -
Accr1g01846 162 PRINTS DnaJ domain signature 60 78 IPR001623 -
Accr1g01846 162 PRINTS DnaJ domain signature 97 117 IPR001623 -
Accr1g01846 162 PRINTS DnaJ domain signature 117 136 IPR001623 -
Accr1g01846 162 SUPERFAMILY Chaperone J-domain 50 127 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01846 Accr-Chr1 48857028 48857516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01846 51 122 C2H2 Transcription Factor Family AT1G74250 43.038 3.69e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01846 - - pcin:129292702 247.669