Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01813 ATGGGTTTTCGTATACCTAGAATCAGAAGGGCCTCTTCATTTTCAAGAAATCTTGCATCTTCAAAAGGAGTTGACGTGCCAAAGGGCTATCTTGCAGTCTATATTGGAAAGAAGATGAAGAGGTTTGTGATTCCCATATCATACTTGTACCAACCTTCATTTCAAAATTTGCTAAGTCAAGCTGAGGAAGAATTTGGTTATGATCATCCAATGGGCGGCCTCACAATTCCTTGCACTGAAGAGGATTTTGAGATTGTAACTTCTTGCTTGAATGGCTGCTGA 282 0.4007 MGFRIPRIRRASSFSRNLASSKGVDVPKGYLAVYIGKKMKRFVIPISYLYQPSFQNLLSQAEEEFGYDHPMGGLTIPCTEEDFEIVTSCLNGC 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01813 93 Pfam Auxin responsive protein 12 90 IPR003676 GO:0009733
Accr1g01813 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 17 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01813 Accr-Chr1 48537853 48538134 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01813 25 92 Calmodulin-binding Proteins AT3G43120 51.471 1.48e-20 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01813 - K14488 gmx:112997793 145.206