Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01805 ATGTCTCCGGCGGCCGCAAAGTGCAGCAAAATCCGACACATTGTCAGAATCCGGCAGATGCTTCTCCGGTGGCGCAAGAAGGCGCGCACAACGGCTGTTCGAACACCATCCGATGTACCGGCCGGGCACGTGGCCGTTTGTGTGGGACCCAGCTGCCGGAGGTTTATCGTGAGAGCAACGTACCTGAACCACCCGGTTTTCAACAAGCTTCTGGCTCAAGCCGAAGAGGAGTACGGTTTTTGCAATCAAGGTCCCTTGACGATCCCTTGCGATGAGTCAATGTTCGAGGAGGTCCTCCGGATCGTGTCCCTGTCTGAATCAGGTCGCTCCTTCCGGTTCTTGAACCGGGATGATCTCCAGATGCGCTGCCACGTGGACTTGGTGGGAGAAACCTTGCCGTTGCTTCATGAGGAGCCCATCTGTTAA 426 0.5657 MSPAAAKCSKIRHIVRIRQMLLRWRKKARTTAVRTPSDVPAGHVAVCVGPSCRRFIVRATYLNHPVFNKLLAQAEEEYGFCNQGPLTIPCDESMFEEVLRIVSLSESGRSFRFLNRDDLQMRCHVDLVGETLPLLHEEPIC 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01805 141 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 26 99 IPR003676 GO:0009733
Accr1g01805 141 Pfam Auxin responsive protein 16 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01805 Accr-Chr1 48414171 48414596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01805 6 141 Calmodulin-binding Proteins AT4G34750 48.322 1.92e-40 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01805 K14488 - qsa:O6P43_011525 209.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g01805 1 48414171 48414596 Accr1g01805 1 48414171 48414596 ECH