Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01794 ATGGAGTTTGCTGCAGCCGAAGCTTTGAAACCCAGTTTACGAAGAGAACTTTCTTTTCAACAGAAAACGCTTTGTGAGGAAATTTTGCACCTGAGCGGAAACAACGGCGTCACGGGCGAGGATTTCTCGGTGGATGACCTTCTTGACTTGTCTCACGATGAGTTTCAGCATGTGTTTGTTGACGACGACGAGAAAAAAGATGGTTCCTTTGTTTCCGACGATGTGAACTCTAACTCCGGCAGTGATTCCGGAACCGGAGATTCAGAGTCGGCTTTCGCAAGCGAGCTCGCCGTTCCGGCCGATGATTTAGCAGAGCTAGAGTGGGTTTCCCACTTCGTAGACGATTCTCTTCTAGAGTTCTCGTATCCGGTTTACTCAGAGCAGTCGAAGGAGAAGCACTCTGCGACAGAGCTCAAACCGGACTCAACGACGGCGAAAACTCCTCGTTTTCCGTCTAAAATTCCGGTGAAAACGAGAAGTACCAAATATAGAAAAGCCAACACTCGTGTCTGGTCATCCAGCTCGATTCTCTTCGTTTCCCGGTCATCTCCGAAGTCATTCTCGGCTGTCGTCAACGCCGGTAAACCGTCGGCGATGAAGCAGAAAAAGAGGAAGCCGGTTGAGGGGGAAACGAGTGGATCCCAGCTACAGCGTCGGTGTAGTCATTGTCATGTGCAAAAGACGCCACAGTGGAGAACCGGCCCACTAGGCGCCAAAACCCTGTGTAACGCGTGCGGTGTCCGGTTCAAGTCCGGTCGGCTTTTTCCAGAGTATAGACCAGCCTGTAGCCCAACTTTCTCGACCGATTTGCACTCAAATAGCCATCGCAAAGTGTTGGAGATTAGGAGGAGGAAAGAGACTGTTGGTCCGGAGGCGGGTTTGAGCCAAACACAGATGGTCCAGAGCTTCTGA 912 0.511 MEFAAAEALKPSLRRELSFQQKTLCEEILHLSGNNGVTGEDFSVDDLLDLSHDEFQHVFVDDDEKKDGSFVSDDVNSNSGSDSGTGDSESAFASELAVPADDLAELEWVSHFVDDSLLEFSYPVYSEQSKEKHSATELKPDSTTAKTPRFPSKIPVKTRSTKYRKANTRVWSSSSILFVSRSSPKSFSAVVNAGKPSAMKQKKRKPVEGETSGSQLQRRCSHCHVQKTPQWRTGPLGAKTLCNACGVRFKSGRLFPEYRPACSPTFSTDLHSNSHRKVLEIRRRKETVGPEAGLSQTQMVQSF 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01794 303 MobiDBLite consensus disorder prediction 72 90 - -
Accr1g01794 303 PIRSF Txn_fac_GATA_plant 8 302 IPR016679 GO:0003677|GO:0005634|GO:0045893
Accr1g01794 303 CDD ZnF_GATA 219 267 IPR000679 GO:0006355|GO:0043565
Accr1g01794 303 SMART GATA_3 214 264 IPR000679 GO:0006355|GO:0043565
Accr1g01794 303 Gene3D - 210 287 IPR013088 GO:0006355|GO:0008270
Accr1g01794 303 FunFam GATA transcription factor 211 297 - -
Accr1g01794 303 ProSitePatterns GATA-type zinc finger domain. 220 245 IPR000679 GO:0006355|GO:0043565
Accr1g01794 303 ProSiteProfiles GATA-type zinc finger domain profile. 214 250 IPR000679 GO:0006355|GO:0043565
Accr1g01794 303 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 216 277 - -
Accr1g01794 303 MobiDBLite consensus disorder prediction 192 213 - -
Accr1g01794 303 Pfam GATA zinc finger 220 253 IPR000679 GO:0006355|GO:0043565
Accr1g01794 303 PANTHER GATA TRANSCRIPTION FACTOR 34 295 - -
Accr1g01794 303 MobiDBLite consensus disorder prediction 129 161 - -
Accr1g01794 303 MobiDBLite consensus disorder prediction 69 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01794 Accr-Chr1 48213788 48214785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01794 8 302 C2C2-Gata Transcription Factor Family AT5G66320 41.369 3.87e-64 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Accr1g01794 GATA 3.8e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01794 - - qsa:O6P43_002035 310.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g01794 1 48213788 48214785 Accr1g01794 1 48213788 48214785 ECH