Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01779 ATGTTGGGAGAAGGAAAAGGAAGAGAAGTGAACAAATGCCAAGACTGTGGGAACCAAGCAAAGAAGGGCTGTGAATTCATGAGATGCAGAAGTTGCTGTAACAATAAAGGCTTTCGCTGCCAAACTCATATCAACAGTACTTGGGCTCCTAACTCTAGGAGACGCCACTTTCACCCCCAAACCCTCACTCACTCTAATAATCCATCTCCAGGAATAGAAGAACGGAATAAGCTGCCGGCTGCGATGAGTTCGGCGGCGGAGTTCCGGTGCGTTCGGGTGCGTTCGGAGGATGATACGGTGGACGAATATGCATATCAAACGTCTGTGAATATAGGAGGACGCGTGTTTAGTGGTGTTCTTTATGATCAAGGCCCTGAAAGCTTATTCTCCTATAATAATTACAACGTTGGTGGTCAAACTTCATCCAAAGCACCTTTGAATCTGATTCATCATCAGCATGGTGACCATTTCATGGACACTTCAATGATTCAATCCCATGCTGTTGCTGATGCTGCCACTTCTACTGTGCCTCCATTAATGATCCCACAGCTGGCCTCTTCTGCTGAGCAATTTTCTTCTTCTCCGTCGTATCCTCTTTCACTTGGAACCTTTAGGCCTCCTGTATCATATTTCACTCAACCAAAGAATTCCTAG 654 0.4572 MLGEGKGREVNKCQDCGNQAKKGCEFMRCRSCCNNKGFRCQTHINSTWAPNSRRRHFHPQTLTHSNNPSPGIEERNKLPAAMSSAAEFRCVRVRSEDDTVDEYAYQTSVNIGGRVFSGVLYDQGPESLFSYNNYNVGGQTSSKAPLNLIHHQHGDHFMDTSMIQSHAVADAATSTVPPLMIPQLASSAEQFSSSPSYPLSLGTFRPPVSYFTQPKNS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01779 217 Pfam Domain of unknown function (DUF702) 73 126 - -
Accr1g01779 217 Pfam Domain of unknown function (DUF702) 11 65 - -
Accr1g01779 217 MobiDBLite consensus disorder prediction 51 72 - -
Accr1g01779 217 NCBIfam LRP1 C-terminal domain 78 125 IPR006511 -
Accr1g01779 217 MobiDBLite consensus disorder prediction 51 73 - -
Accr1g01779 217 NCBIfam putative zinc finger domain, LRP1 type 12 54 IPR006510 -
Accr1g01779 217 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 5 182 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01779 Accr-Chr1 47958684 47959434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01779 12 135 C2H2 Transcription Factor Family AT2G21400 47.887 1.23e-42 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Accr1g01779 DUF702 8.6e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01779 - - pcin:129292149 259.61