Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01778 ATGGGCGACGCTCGGGGCGGAGGTTGTTGCCCGCCGATGGATCTTTTCCGGTCGGAGCCGATGCAGCTGGTTCAGCTCATCATTCCCATGGAGTCCGCTCATCTTACTGTCTCTTACCTCGGTGATCTAGGTCTTCTTCAGTTCAAAGATCTCAACGTTGAGAAGAGCCCTTTTCAACGGGCTTATGCAAGTCAGCTAAAAAGATGTGGAGAGATGGCAAGGAAGATACGATTTTTCAAGGAGCAAATGTTGAAGGCTGGTGTTTCATCTACGACTTTGGCTACTAAAGTTGATGTGAACATAGATGATTTAGAGGTAAAACTTTCTGAGCTGGAGGCAGAATTAACTGAGATGAATGCGAATGGTGAAAAGTTGCAGCGGTCTCACAATGAACTTGTGGAATATAAGCTTGTTCTTCAGAAGGCTGGAGAGTTTTTCCATTCAGCTCAGAATCGTGCCTTGGAGCAGCAGAGAGAACTTGAATCACGTCAGAGTGGAGGATCTATGGAAACACCTTTATTACAAGATCAAGAAATGTCAACAGATCCATCAAAGCAGGTGAAGTTGGGTTTTCTAGCTGGTCTTGTTCCCAGGGAACGATCCATGGCATTTGAGAGAATTTTATTTCGTGCTACTAGGGGCAATTTGTTTCTGAGGCAAGTCATTGTTGAGGATCCTGTCACAGACCCTGTTTCTGGAGAAAAGATTGAGAAAAATGTATTTTTAGTCTTCTATGCTGGTGAAAGAGCAAAAGCCAAGATTCTGAAAATTTGTGAAGCCTTTGGAGCAAATCGTTATCCTTTTGCTGAGGAATCAAGAAAACAGGCTCAAATGATTGCAGAGGTTTCAGCAAGACTCTCAGAGTTGAAGACTACTATAGATGCTGGACAGCTGCACCGGGGTAACTTGCTACAGACTATTGGCGATCAATTTGATCATTGGAATGTTTTGGTGAGAAAGGAGAAATCCATATATCATACCCTGAACATGCTTAGCCTTGATGTGACCAAAAAATGCCTCGTGGCTGAGGGTTGGAGTCCTGTTTATGCAACAAAGCAGATACAAGATGCCTTGGACCGGGCAGCGTTTGACTCTAACTCCCAAGTTGGTGCCATTTTCCAAGTTTTGCATACCAGGGAGCCACCACCCACCTATTTCCAGACAAATAAATTCACTTCTTCTTTTCAAGCTATTGTTGATGCATATGGGGTGGCTAAGTATCAGGAGGCAAATCCTGCTGTATATACCATAATTACCTTTCCATTTCTTTTTGCGGTGATGTTTGGTGATTGGGGGCATGGAATATGTTTACTACTTGCAACTTTGTATTTAATAATCAGGGAGAAGAAGTTTTCTCGCCAGAAGCTTGGAGATATTATGGAAATGACTTTTGGAGGTCGTTATGTTATTTTGATGATGTCCCTCTTCTCAATCTTCACTGGTTTGATCTATAATGAGTTCTTCTCCGTCCCATTTGAACTCTTTGCTCCCTCAGCATATTCATGCCGTGACTTTTCTTGCAGAGATGCAACTACCGAAGGTTTGATAAAAGTGCGTCCCACATACCCATTTGGAGTGGACCCTGTATGGCATGGGACAAGAAGTGAATTGCCATTCCTGAATTCATTGAAAATGAAGATGTCAATTCTTCTTGGGGTGGCTCAGATGAACCTTGGAATCATACTAAGCTTCTTCAATGCCATATTCTTTCGCAATGGCCTGAATGTATGGTTCCAATTTATTCCCGAGATTATATTTCTCAACAGTTTGTTTGGTTACCTATCTCTCCTTATCATTGTGAAGTGGTGCACCGGTTCACAAGCCGATTTATACCATGTAATGATCTACATGTTCCTGAGTCCTACAGATGATTTGGGAGAAAACCAGCTCTTTCCTGGTCAGAAAACTTTACAGCTTGTACTGCTACTTCTGGCCCTTGTCTCTGTGCCCTGGATGTTGATACCAAAACCTTTTCTTTTGAAGAAGCAACATGATAGGCACCAGGGTGAATCCTATGCACCACTTGAAAGCACGGAGGAGAGCTTGCTCGTGGAGTCAAATCATGATTCCCATGGTCATGAGGAATTTGAGTTCAGTGAAGTCTTTGTGCATCAACTCATACATACCATTGAATTTGTACTTGGAGCAGTGTCTAATACTGCTTCTTACCTTCGTCTATGGGCTCTTAGCCTTGCACATTCGGAGTTGTCAAGTGTTTTCTATGAGAAGGTCCTTCTTCTTGCATGGGGGTACAACAATGTGATCATTCTTATAGTGGGTTTCATTGTCTTTGCTTTTGCAACTGTGGGGGTGTTACTTGTGATGGAAACCCTCAGCGCCTTCCTCCATGCTCTGCGTCTTCACTGGGTAGAGTTCCAAAATAAGTTCTATGAGGGAGATGGTTACTTGTTCCATCCTTTCTCGTTTGCGTTGCTTGATGATGAAGACGAGTGA 2454 0.4311 MGDARGGGCCPPMDLFRSEPMQLVQLIIPMESAHLTVSYLGDLGLLQFKDLNVEKSPFQRAYASQLKRCGEMARKIRFFKEQMLKAGVSSTTLATKVDVNIDDLEVKLSELEAELTEMNANGEKLQRSHNELVEYKLVLQKAGEFFHSAQNRALEQQRELESRQSGGSMETPLLQDQEMSTDPSKQVKLGFLAGLVPRERSMAFERILFRATRGNLFLRQVIVEDPVTDPVSGEKIEKNVFLVFYAGERAKAKILKICEAFGANRYPFAEESRKQAQMIAEVSARLSELKTTIDAGQLHRGNLLQTIGDQFDHWNVLVRKEKSIYHTLNMLSLDVTKKCLVAEGWSPVYATKQIQDALDRAAFDSNSQVGAIFQVLHTREPPPTYFQTNKFTSSFQAIVDAYGVAKYQEANPAVYTIITFPFLFAVMFGDWGHGICLLLATLYLIIREKKFSRQKLGDIMEMTFGGRYVILMMSLFSIFTGLIYNEFFSVPFELFAPSAYSCRDFSCRDATTEGLIKVRPTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIILSFFNAIFFRNGLNVWFQFIPEIIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDDLGENQLFPGQKTLQLVLLLLALVSVPWMLIPKPFLLKKQHDRHQGESYAPLESTEESLLVESNHDSHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLLAWGYNNVIILIVGFIVFAFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYLFHPFSFALLDDEDE 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01778 817 PANTHER VACUOLAR PROTON ATPASES 15 814 IPR002490 GO:0033179|GO:0046961|GO:1902600
Accr1g01778 817 Coils Coil 94 128 - -
Accr1g01778 817 Pfam V-type ATPase 116kDa subunit family 39 809 IPR002490 GO:0033179|GO:0046961|GO:1902600
Accr1g01778 817 PIRSF ATP6V0A1 11 817 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01778 Accr-Chr1 47930436 47938910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01778 13 817 Primary Pumps ATPases(2) AT4G39080 79.481 0.0 1316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01778 K02154 - gmx:100810062 1373.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g01778 1 47930436 47938910 Accr1g01778 1 47930436 47938910 ECH