LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr1g01772	ATGGCTTCCCCCACCACCACCCTCCTCTTCCTTATTATTCTCTCGGCTTTCTCTTCCTCCTTATTGACCCCTGCCTCCTCACAAACCACCACCTCCTCCTCCTCCAGATTCTCCACAAAAGACAACATCCTCATCGATTGTGGCGCCGATTCTCCGGCCACCGTCCCCGACGGACGATTATTCAAATCCGACGCAGAATCTCTCACCTACCTGAATGCCAGTGACGAGTATAAAGCCACAGATAGTAAAGCCAATGTTCCTTCCCCTGTATATTCTAGTTGCAGAATCTTCAAGCAGGAAGCTAAATACTCTTTCCATTTAACCCAACCTGGTTTTCATTGGGTTCGCCTCCATTTCTTCCCTGTCAAAACCGATACTTTTGATCTCCAAAAAGCCACTTTCTCTGTTATGACACAAAAATTTGTTCTCCTTCATAATTTTAACTTCAACAACAGCGATAACCCTATCGTTAAAGAGTACCTAATAAATGCAACCGACAGTCTCTTATCCTTAACCTTCTCGCCCCTTAAGAATTCTGCTGCTTTCATTAACGCCATCGAAGTTGTATCGGCCCCCGACAGTTTGATCTCCGACGCCGGTTCGGCTCTGTTCCCTGTCGGTGAATTCTCAGGTCTCTCAAACTATGCCTTTCAAGCAGTTTACAGAGTCAACAATGGAGGTCCTCTGATCACGTCGGCAAATGACACTCTGGGAAGAACTTGGGTTTCCGATGAGAATTTTCTCACGAACAAGAACTTGGCAAAAAGTGTTTCGGTTGCCCCAAATGTGATCAAATTCCCCCAAAACCAACCCACCATGTCTACTCTAATAGCCCCACAAACTGTATATGCTTCAGCCACAGAAATGGCTGACGCACAAGTGAACCAACCCAAGTTTAATGTGTCGTGGAAATTTGACGTTGATACTGCTTTTAGTTACCTCATAAGACTCCATTTCTGCGACATTGTAAGTGAAAGCCTTAACCAGCTTTACTTTAATGTGTATGTAAACCAGAAGATGGCGGTTGCTAGCCTCGATTTGTCCGCCTTGACGGGAGCTTTAACGACGCCGTTTTATAAGGATATTGTGGTGAACGCGTCGTTGATGGGGCAGGGGCTATCGATTCAGGTGGGTCCGGCGCAGTCAGACGGTGGCGACGTGAATGCAATAGTGAATGGAATTGAAGTGATGAAGATAAGCAATACGGTGAACAGCTTGGATGGAGAATTCGGGGTGGACGGTCAGAGCAGTAGCGGTGGCGGTCCGAACCGGGGGACGGTGGCGGCGGTTGGGTTTGCTATGATGTTTGGAGCGTTTGTGGGGCTGGGGGCGATGGTGGTGAAGTGGCACAAGAGACCTCAAGATTGGCAAAGGAGAAACAGCTTCTCTTCATGGTTGCTTCCTCTTCATGCAGGTGATAATAGCTTCACGAAAAGCTCAATGGGGTCACAGAAAAGCACCTTTAACTCTTCATCAATGGGGTTGGGCCGATACTTCTCCTTCGCAGAGCTACAAGAAGCCACAAAGAACTGGGACTCTAAAGCCATTATCGGAGTTGGCGGCTTCGGTAACGTCTACCTGGGAATCATCGACGAAGGAACAAAAGTTGCCGTCAAAAGAGGAAACCCACAATCGGAACAAGGAATCAACGAGTTCCAAACAGAGATTCAAATGCTCTCCAAGCTAAGACACAGACACCTAGTTTCTCTCATCGGATACTGCGACGAGAACGACGAGATGATCTTAGTCTATGAATTCATGTTAAACGGCCCTTTCAGAGATCATCTCTACGGCAAGAACCGTACTCCTCTCTCATGGAAGCAAAGGCTCGAAATCTGCATCGGCTCGGCACGTGGACTTCACTATCTCCACACCGGAACCGCCCAAGGCATCATCCACCGCGACGTCAAGACCACCAACATCCTCCTGGACGAGAACTTCACGGCCAAGGTATCTGATTTTGGACTCTCCAAGGATGCACCAATAGGGCAAGGCCACGTCAGCACGGCGGTGAAGGGTAGTTTTGGGTATTTAGACCCTGAGTACTTCAGGAGGCAGCAATTAACAGATAAATCAGACGTTTACTCTTTTGGAGTAGTATTGTTGGAGTCATTGTGCGCTAGGGCACCTTTGAACCCTCAGTTACCAAGAGAACAAGTGAACTTGGCTGATTGGGCAATGCAATGGAAGAGAAAAGGGTTGCTTGAGAAGATTATAGACCCTCTCCTTGTGGGTACAATTTGCCCAGAATCCATGACCAAGTTTGCTGAAGCAGCTGAGAAGTGTTTGGCTGATTATGGAGTTGAAAGGCCTTCCATGGGGGATGTGTTGTGGAATTTGGAATATGCTCTGCAGCTTCAAGAAGCTTACATGCAAGGAAAATCTGATGATGTCGCCGCCGACCCTTTGCCGCCGGCCGCTTCTTCCCCTACTGCAGCAACAACAACACCGGCGGCAAATCCTTCTCTTCCTCCTGGTGCCGCCCCGATGACAACCACCTCGGAACAAGCACATATTACCGTTAATAATCCCGCTGCCGTGCCGGAAAATAAACCCCTTGATGATAGTGATTCAGGAGCTGCAATGTTTGGCCAATTTGCTAATAACCTCAGTGGCAGGTGA	2622	0.4817	MASPTTTLLFLIILSAFSSSLLTPASSQTTTSSSSRFSTKDNILIDCGADSPATVPDGRLFKSDAESLTYLNASDEYKATDSKANVPSPVYSSCRIFKQEAKYSFHLTQPGFHWVRLHFFPVKTDTFDLQKATFSVMTQKFVLLHNFNFNNSDNPIVKEYLINATDSLLSLTFSPLKNSAAFINAIEVVSAPDSLISDAGSALFPVGEFSGLSNYAFQAVYRVNNGGPLITSANDTLGRTWVSDENFLTNKNLAKSVSVAPNVIKFPQNQPTMSTLIAPQTVYASATEMADAQVNQPKFNVSWKFDVDTAFSYLIRLHFCDIVSESLNQLYFNVYVNQKMAVASLDLSALTGALTTPFYKDIVVNASLMGQGLSIQVGPAQSDGGDVNAIVNGIEVMKISNTVNSLDGEFGVDGQSSSGGGPNRGTVAAVGFAMMFGAFVGLGAMVVKWHKRPQDWQRRNSFSSWLLPLHAGDNSFTKSSMGSQKSTFNSSSMGLGRYFSFAELQEATKNWDSKAIIGVGGFGNVYLGIIDEGTKVAVKRGNPQSEQGINEFQTEIQMLSKLRHRHLVSLIGYCDENDEMILVYEFMLNGPFRDHLYGKNRTPLSWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKTTNILLDENFTAKVSDFGLSKDAPIGQGHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLESLCARAPLNPQLPREQVNLADWAMQWKRKGLLEKIIDPLLVGTICPESMTKFAEAAEKCLADYGVERPSMGDVLWNLEYALQLQEAYMQGKSDDVAADPLPPAASSPTAATTTPAANPSLPPGAAPMTTTSEQAHITVNNPAAVPENKPLDDSDSGAAMFGQFANNLSGR	873

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr1g01772	873	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	631	643	IPR008271	GO:0004672\|GO:0006468
	Accr1g01772	873	SMART	serkin_6	511	783	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr1g01772	873	ProSiteProfiles	Protein kinase domain profile.	511	783	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr1g01772	873	PANTHER	OS07G0166700 PROTEIN	497	787	IPR045272	GO:0004714\|GO:0006468
	Accr1g01772	873	Gene3D	Transferase(Phosphotransferase) domain 1	587	801	-	-
	Accr1g01772	873	SUPERFAMILY	Protein kinase-like (PK-like)	486	781	IPR011009	-
	Accr1g01772	873	FunFam	Receptor-like protein kinase FERONIA	587	799	-	-
	Accr1g01772	873	Pfam	Malectin-like domain	45	399	IPR024788	-
	Accr1g01772	873	Gene3D	-	216	401	-	-
	Accr1g01772	873	Gene3D	-	42	192	-	-
	Accr1g01772	873	Pfam	Protein tyrosine and serine/threonine kinase	515	711	IPR001245	GO:0004672\|GO:0006468
	Accr1g01772	873	FunFam	receptor-like protein kinase FERONIA	475	586	-	-
	Accr1g01772	873	FunFam	Putative receptor-like protein kinase	42	192	-	-
	Accr1g01772	873	MobiDBLite	consensus disorder prediction	808	843	-	-
	Accr1g01772	873	CDD	STKc_IRAK	517	781	-	-
	Accr1g01772	873	MobiDBLite	consensus disorder prediction	795	873	-	-
	Accr1g01772	873	Gene3D	Phosphorylase Kinase; domain 1	472	586	-	-
	Accr1g01772	873	ProSitePatterns	Protein kinases ATP-binding region signature.	517	539	IPR017441	GO:0005524
	Accr1g01772	873	FunFam	Receptor-like protein kinase FERONIA	216	401	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr1g01772	Accr-Chr1	47893133	47895849	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr1g01772	37	873	Receptor kinase-like Gene Family	AT4G39110	67.497	0.0	1175

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Accr1g01772		Malectin_like	2.5e-40	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr1g01772	-		-	gmx:100793784	1262.67