Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01730 ATGGCTTCAAGCTCTCTGAGCAAAAAGAGGGCCTGTGATTCCTCATCATGGACACCTAAACAGAACAAGATGTTTGAGAAGGCTCTTGCAAAATACGACAAGGACACTCCTGATCGATGGCAGAATGTGGCTAAAGCGGTTGAAGGAAAATCAGCTGAGGAAGTTAAGACACACTATGAAATCCTCTTAGAGGATCTAGGCCACATTGAGTCTGGTCATGTTCCCATCCCAAACTACAAATCCAGTACCGCTACCACCGCCAATGATGATGTTGAAAAAGATAGGCCTATGAAGTATCGTCAGCTGAATTGA 312 0.4455 MASSSLSKKRACDSSSWTPKQNKMFEKALAKYDKDTPDRWQNVAKAVEGKSAEEVKTHYEILLEDLGHIESGHVPIPNYKSSTATTANDDVEKDRPMKYRQLN 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01730 103 ProSiteProfiles Myb-like domain profile. 15 63 IPR001005 -
Accr1g01730 103 FunFam Transcription factor SRM1 9 76 - -
Accr1g01730 103 Pfam Myb-like DNA-binding domain 15 59 IPR001005 -
Accr1g01730 103 MobiDBLite consensus disorder prediction 87 103 - -
Accr1g01730 103 SUPERFAMILY Homeodomain-like 15 70 IPR009057 -
Accr1g01730 103 Gene3D - 10 76 - -
Accr1g01730 103 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 89 IPR044636 GO:0003700
Accr1g01730 103 MobiDBLite consensus disorder prediction 72 103 - -
Accr1g01730 103 CDD SANT 16 63 IPR001005 -
Accr1g01730 103 SMART sant 13 65 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01730 Accr-Chr1 47333983 47334542 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr1g01730 Myb_DNA-binding 3.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01730 - - gmx:100785292 151.754
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g01730 1 47333983 47334542 Accr1g01730 1 47333983 47334542 ECH
Accr1g01730 1 47333983 47334542 Accr10g00029 10 380313 380531 ECH