Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01724 ATGGCTTCTGCAGATGTTGAGTACCGTTGCTTTGTCGGTGGGCTGGCTTGGGCTACCGACAACGATGCCCTCAGCCAGGCATTTGCTCCTTTCGGCGATGTTATCGAATCGAAGATTATTAACGATCGCGAGACTGGAAGGTCCAGAGGGTTCGGATTCGTGACATTCTCCTCAGAGCAGTCCATGAGGGATGCGATCGAAAACATGAACGGTCAGAGCCTTGATGGCCGGAACATCACTGTGAACGAAGCTCAGTCTCGAGGAAGAGGCGGCGGCAGTGGTGGTGGTTACGGCGATGGGGGTGGCTATGGCCGTGGTGGAGGTGGATACGGAGGCGGGGGACGCCGTGAGGGTGGATACAACAAGAGCGGTGGAGGATATGGTGGCGGTTATGGTGATCGCGGGTCTCGCTACTCTAGGCGTGGCGAGTCCGATGGAAGCTGGAAGAATTAA 453 0.5651 MASADVEYRCFVGGLAWATDNDALSQAFAPFGDVIESKIINDRETGRSRGFGFVTFSSEQSMRDAIENMNGQSLDGRNITVNEAQSRGRGGGSGGGYGDGGGYGRGGGGYGGGGRREGGYNKSGGGYGGGYGDRGSRYSRRGESDGSWKN 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01724 150 MobiDBLite consensus disorder prediction 136 150 - -
Accr1g01724 150 Gene3D - 2 104 IPR012677 -
Accr1g01724 150 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 5 142 - -
Accr1g01724 150 MobiDBLite consensus disorder prediction 70 87 - -
Accr1g01724 150 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Accr1g01724 150 MobiDBLite consensus disorder prediction 70 150 - -
Accr1g01724 150 SMART rrm1_1 9 82 IPR000504 GO:0003723
Accr1g01724 150 CDD RRM2_NsCP33_like 9 84 - -
Accr1g01724 150 SUPERFAMILY RNA-binding domain, RBD 8 117 IPR035979 GO:0003676
Accr1g01724 150 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01724 Accr-Chr1 47225149 47225863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01724 10 87 Eukaryotic Initiation Factors Gene Family AT2G23350 32.051 8.21e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01724 - K13195 qsa:O6P43_001900 159.458