Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01689 ATGGTGGTTTCTAAGTTAACATACGAAGAATGCAGGCGACAACGGCTAGAAGAAAACAAGAAGAGAATGGAAGAGCTCAACCTCAACAAGCTTGCTTCTGCCTTGAAACCTTCACCTAATAAATCTTCCCCTGCTAAGGCTAGGGTGCCACGTCAGCCTGTGAGTCCTTCTTCTGCTCCAGTAAGAAGGTCTATTCGCGTAGCCAGCTTACCTTCTCCAAACTATAAGGACGTTCCCATTGAACCTTTGGTGAGACCAAGAAGGTCCTATCAGAAAAGGGACTTGCTAAATCGAGTTTATGCTTCAGATGAAGTTAGGCAATATGCAATTGATAGAGCTGAAGAACTTCTCTCTGGTTTAGATTCTAAATACCCAAGTTTCACCAAACCTATGCTCCAATCACATGTCACTGGAGGATTTTGGCTAGGTCTTCCAGTTCAGTTCTGTAAAACCCATCTTCCTGACCATGATGAAACAATAACTCTAATAGATGAGGATGGGAACGAGTCTTCCACCAAATTCCTTGCTGATAAACCTGGTCTTAGTGGTGGTTGGAGGGGTTTCTCAATTGATCATGAACTAGTTGATGGGGATGCATTAGTGTTTCAACTGATCAAACCCACAGAATTTAAGGTGTTCGTAATTAGAGCATATAAATCAGAAAACAAAGAGGAAGGAAATGAAGATTTGGATGCGTCACACTTGAACAGGAGCTCCAAAAGAGTCAGAGCAAGTACAAGGTAG 744 0.4247 MVVSKLTYEECRRQRLEENKKRMEELNLNKLASALKPSPNKSSPAKARVPRQPVSPSSAPVRRSIRVASLPSPNYKDVPIEPLVRPRRSYQKRDLLNRVYASDEVRQYAIDRAEELLSGLDSKYPSFTKPMLQSHVTGGFWLGLPVQFCKTHLPDHDETITLIDEDGNESSTKFLADKPGLSGGWRGFSIDHELVDGDALVFQLIKPTEFKVFVIRAYKSENKEEGNEDLDASHLNRSSKRVRASTR 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01689 247 Coils Coil 6 33 - -
Accr1g01689 247 MobiDBLite consensus disorder prediction 223 247 - -
Accr1g01689 247 SUPERFAMILY DNA-binding pseudobarrel domain 120 216 IPR015300 -
Accr1g01689 247 Pfam B3 DNA binding domain 127 214 IPR003340 GO:0003677
Accr1g01689 247 ProSiteProfiles B3 DNA-binding domain profile. 127 218 IPR003340 GO:0003677
Accr1g01689 247 CDD B3_DNA 125 216 IPR003340 GO:0003677
Accr1g01689 247 Gene3D - 103 219 IPR015300 -
Accr1g01689 247 SMART B3_2 127 221 IPR003340 GO:0003677
Accr1g01689 247 MobiDBLite consensus disorder prediction 223 238 - -
Accr1g01689 247 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 38 221 IPR044837 -
Accr1g01689 247 MobiDBLite consensus disorder prediction 32 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01689 Accr-Chr1 46735945 46737813 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01689 1 236 B3 DNA Binding Superfamily AT3G19184 59.917 1.44e-86 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Accr1g01689 B3 2.1e-13 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01689 - - pcin:129293089 419.468