Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01688 ATGGGCAAACACACCTGGACGAAAATGGTGGTTTCTAAGTTAACATACGAAGAATGCAGGCGACAACGGCTAGAAGAAAACAAGAAGAGAATGGAAGAGCTCAACCTCAACAAGCTTGCTTCTGCCTTGAAACCTTCACCTAATAAATCTTCCCCTGCTAAGGCTAGGGTGCCACGTCAGCCTGTGAGTCCTTCTTCTGCTCCAGTAAGAAGGTCTATTCGCGTAGCCAGCTTACCTTCTCCAAACTATAAGGACGTTCCCATTGAACCTTTGGTGAGACCAAGAAGGTCCTATCAGAAAAGGGACTTGCTAAATCGAGTTTATGCTTCAGATGAAGTTAGGCAATATGCAATTGATAGAGCTGAAGAACTTCTCTCTGGTTTAGATTCTAAATACCCAAGTTTCACCAAACCTATGCTCCAATCACATGTCACTGGAGGATTTTGGCTAGGTCTTCCAGTTCAGTTCTGTAAAACCCATCTTCCTGACCATGATGAAACAATAACTCTAATAGATGAGGATGGGAACGAGTCTTCCACCAAATTCCTTGCTGATAAACCTGGTCTTAGTGGTGGTTGGAGGGGTTTCTCAATTGATCATGAACTAGTTGATGGGGATGCATTAGTGTTTCAACTGATCAAACCCACAGAATTTAAGGTGTTCGTAATTAGAGCATATAAATCAGAAAACAAAGAGGAAGGAAATGAAGATTTGGATGCGTCACACTTGAACAGGAGCTCCAAAAGAGTCAGAGCAAGTACAAGGTAG 768 0.4271 MGKHTWTKMVVSKLTYEECRRQRLEENKKRMEELNLNKLASALKPSPNKSSPAKARVPRQPVSPSSAPVRRSIRVASLPSPNYKDVPIEPLVRPRRSYQKRDLLNRVYASDEVRQYAIDRAEELLSGLDSKYPSFTKPMLQSHVTGGFWLGLPVQFCKTHLPDHDETITLIDEDGNESSTKFLADKPGLSGGWRGFSIDHELVDGDALVFQLIKPTEFKVFVIRAYKSENKEEGNEDLDASHLNRSSKRVRASTR 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01688 255 Coils Coil 14 41 - -
Accr1g01688 255 Gene3D - 111 227 IPR015300 -
Accr1g01688 255 MobiDBLite consensus disorder prediction 231 255 - -
Accr1g01688 255 CDD B3_DNA 133 224 IPR003340 GO:0003677
Accr1g01688 255 ProSiteProfiles B3 DNA-binding domain profile. 135 226 IPR003340 GO:0003677
Accr1g01688 255 MobiDBLite consensus disorder prediction 231 246 - -
Accr1g01688 255 Pfam B3 DNA binding domain 135 222 IPR003340 GO:0003677
Accr1g01688 255 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 45 229 IPR044837 -
Accr1g01688 255 SMART B3_2 135 229 IPR003340 GO:0003677
Accr1g01688 255 SUPERFAMILY DNA-binding pseudobarrel domain 128 224 IPR015300 -
Accr1g01688 255 MobiDBLite consensus disorder prediction 40 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01688 Accr-Chr1 46735835 46737813 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01688 9 244 B3 DNA Binding Superfamily AT3G19184 59.917 2.17e-86 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Accr1g01688 B3 2.2e-13 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01688 - - pcin:129293089 419.468