Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01671 ATGGGAGTTTGTGTCTCTAAGCCATCGCAACGGAATCCCTATGCGGGTAAGCAAACAGAAGAAGAAGACCATGAGAATCGGTATGAAGATTCTTCTTCTTCTCAAATCCCGAAATCCCCGCATTCTCCCATCACGAACAACTACCACCGGGAAGATGACGTCACTACCGGGAAGAAGTCTCCGTTGTTCCCCTTCTACAGCCCTAGTCCAGCTCATTTTCTCAAGAATTCTCCGGCCTCGACGCCGGGAGGGAGCAAGAGCGCGAGTTCGACGCCAAGGAGGTTCTTCCGGCGGCCTCTTCCTCCGCCGTCGCCGGCCAAGCACATAAAGGCTGTGCTGGCGAGGAGGCAGGGGAGGAAGGCTGCGAAAGCTATTCCCGAAGAAGGAGAGGAAGAAGAATCCAGAGATTTGGACAAGAGGTTTGGGTTTTCGAAGGAATTTACGAGTAGATTGGAGGTTGGGGAAGAAATAGGAAGAGGACATTTTGGTTTTACATGCTCTGCTAGGTTCAAGAAGGGTGAACGTAAGGGTCAGCAAGTGGCCGTGAAGGTCATTCCTAAGGCTAAGATGACCACAGCAATTGCAGTTGAAGATGTTAGAAGGGAGGTGAAAATATTACGAGCCTTGGCTGGACACAACAATCTGGCACAATTCTATGATGCCTTTGAAGATCAAGATAATGTCTATATTGTAATGGAGTTATGTGAAGGAGGCGAGCTGTTGGATAGAATACTTTCAAGAGGAGGGAAATACTCAGAAGATGACGCAAAAGCTGTTATTACACAGATACTGAATGTTGTTGCGTTCTGTCATCTTCAGGGTGTGGTGCACAGGGATCTTAAGCCGGAGAATTTTTTGTATGTTTCAAAGGATGAGAACGCTGAATTAAAAGCTATTGACTTTGGATTATCAGACTTTGTCAAACCAGATGAAAGGCTCAATGATATCGTGGGCAGTGCATACTATGTGGCCCCTGAAGTTCTACATAGATCTTACAGTACAGAAGCTGACGTGTGGAGTATAGGCGTGATAGCATATATTCTCTTATGTGGTAGTCGTCCATTTTGGGCCCGAACAGAGTCTGGTATATTCAGGGCTGTTCTAAAAGCTGATCCAAGCTTTGATGAACCTCCTTGGCCATCCTTATCTTCAGAAGCAAAAGATTTTGTCAAGCGCATGTTGAATAAGGACCCAAGGAAGCGAATATCAGCTGCTCAGGCTCTAAGTCATCCTTGGATTAGGAACTTCAACAATGTAAAAGTTCCTCTTGATATTTTAATATTTAAGCTCATGAAGGCTTATATGCGATCATCATCCTTGCGCAAGGCCTCTTTAAGGGCACTGTCAAAGACATTGACTGCTGATGAGCTCTATTATCTGAGGGAGCAATTTGCTCTGCTGGAGCCAAGCAAAAATGGCAGCATAACATTAGAAAACATCAAGATGGCGCTGATGAAACACGCAACAGATGCCATGAAAGAGTCCCACATTTCTGATTTTATTGCCTCGCTAAATCCATTACAATATAGAAGAATGGGTTTTGAAGAATTTTGTGCCGCTGCATTAAGTGTGCATCAGCTTGAAGCTCTTGATCGTTGGGAGCAACATGCACGCTGTGCATATGAAATCTTTGACAAAGATGGAAACAGAGCTATTGTCATTGAAGAACTTGCCTCAGAACTTGGACTTGGCCCTTCTATCCCCCTTCATGTTGTACTTGTGGATTGGATAAGGCATACTGATGGGAAGCTAAGCTTTCTTGGGTTTGTCAAATTATTACACGGTGTATCTGGCCGAACTCTTTCAAAGGTGCAATAG 1818 0.4488 MGVCVSKPSQRNPYAGKQTEEEDHENRYEDSSSSQIPKSPHSPITNNYHREDDVTTGKKSPLFPFYSPSPAHFLKNSPASTPGGSKSASSTPRRFFRRPLPPPSPAKHIKAVLARRQGRKAAKAIPEEGEEEESRDLDKRFGFSKEFTSRLEVGEEIGRGHFGFTCSARFKKGERKGQQVAVKVIPKAKMTTAIAVEDVRREVKILRALAGHNNLAQFYDAFEDQDNVYIVMELCEGGELLDRILSRGGKYSEDDAKAVITQILNVVAFCHLQGVVHRDLKPENFLYVSKDENAELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRSYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEPPWPSLSSEAKDFVKRMLNKDPRKRISAAQALSHPWIRNFNNVKVPLDILIFKLMKAYMRSSSLRKASLRALSKTLTADELYYLREQFALLEPSKNGSITLENIKMALMKHATDAMKESHISDFIASLNPLQYRRMGFEEFCAAALSVHQLEALDRWEQHARCAYEIFDKDGNRAIVIEELASELGLGPSIPLHVVLVDWIRHTDGKLSFLGFVKLLHGVSGRTLSKVQ 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01671 605 CDD STKc_CAMK 152 412 - -
Accr1g01671 605 Gene3D - 436 595 - -
Accr1g01671 605 SMART serkin_6 151 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01671 605 MobiDBLite consensus disorder prediction 16 31 - -
Accr1g01671 605 FunFam CDPK-related kinase 1 449 522 - -
Accr1g01671 605 FunFam CDPK-related kinase 3 143 315 - -
Accr1g01671 605 Gene3D Transferase(Phosphotransferase) domain 1 241 435 - -
Accr1g01671 605 SUPERFAMILY EF-hand 442 595 IPR011992 -
Accr1g01671 605 MobiDBLite consensus disorder prediction 1 106 - -
Accr1g01671 605 FunFam Calcium-dependent protein kinase SK5 323 417 - -
Accr1g01671 605 Pfam Protein kinase domain 152 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01671 605 SUPERFAMILY Protein kinase-like (PK-like) 147 453 IPR011009 -
Accr1g01671 605 PANTHER SERINE/THREONINE-PROTEIN KINASE 135 573 - -
Accr1g01671 605 Gene3D Phosphorylase Kinase; domain 1 153 240 - -
Accr1g01671 605 ProSitePatterns Protein kinases ATP-binding region signature. 157 183 IPR017441 GO:0005524
Accr1g01671 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Accr1g01671 605 MobiDBLite consensus disorder prediction 73 92 - -
Accr1g01671 605 ProSiteProfiles Protein kinase domain profile. 151 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01671 605 FunFam CDPK-related kinase 1 144 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01671 Accr-Chr1 46495098 46499645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01671 1 601 EF-hand Containing Proteins AT3G50530 69.984 0.0 908
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Accr1g01671 Pkinase 8.7e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01671 K13412 - gmx:100798913 988.793