Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01664 ATGGGTTCGGTTCCTCCAGAACTGAGCTTGGATTTGAGGCCCACTTTCGTTCCCAAGACGATCAGTGATTTTCTCTACGAGGTTTCCGCGATCGGAAACGCCGCCGACAGGTTGTCGAGGTTCGATGAGTTTCTCAAGAGACTGGAAGAAGAAATGATGAAGATCGACGTTTTCAAGCGGGAGCTTCCTCTTTGCCTGCTCCTCTTGAATGATGCAATCTTGACTCTGAGGGAGGAGTCAGCAAAACTCAGGACACCAATTTCTCTGCCAGTGCTTGAAGAATTTATTCCCTTGACGAAAAATTGTGATCAGGAAAAGGATGATAAGAAAGAAAAGGACTGCATAGATAAGAAGAATTGGATGAGTTCTGTTCAGCTCTGGAATACAGATAATCATCCCACTACTAACAATGCTTATGACCAAAGGCAACACTGTGAATTAGAAACCAAGAAATGCGAAGACGGAGGACAATCTGTACCTGAGGACCCATTTCAATCTTGTAGAAAAAGTGATAATGGATGCAGGGCGTTTTTGCCTTTTTCATCCTACTCTAGCATCCCTGTGACACCAGTGACAACTAAGGAAGAAAAGGAAGACTCCATTAATGATCTTTCTCTTATGACTCCTGGTACTAAAAATTTCAGGGAAGGTTCTGGTTCAAGTGGATCAAGAAGTGGCTCTAGCAGAGCAGTTTCTTCCTCGACTCCTGGTTTACAGCCAATTATACCCCCAGGTCATCAACAGCCACAGAAGCAAGTTGCCAGGAAACAGAGGAGGTGCTGGTCACCAGAGCTGCATCGACGATTTGTCAATGCTCTACAGCAACTCGGAGGTTCTCTAGCGGCAACCCCTAAACAAATAAGAGATCTCATGCAGGTTGATGGCCTGACCAACGACGAAGTGAAAAGTCATTTACAAAAATATCGACTTCACGCTCGAAGAACACTGGCTACCACAGCTGCAACTGCTAATCAATCTGTTGTTCTACGAGGTTTGTGGATGTCCCAAGATCAGCACAATGAATCCTCCAAGGCTAGTAGTTCTGGTTCTGGTTCTCCTCAAGGTCCCCTCCAGTTAGCAGCATCTGGTGGAGCGATGTTTCGAACTGAAGGTGACAGCATGGAAGATGATGAAGATGAAAAATCAGAGTGCGTTAGCTGGAAAAGTCACACTCACAGACCTGGAAAAGATGTATAG 1197 0.4528 MGSVPPELSLDLRPTFVPKTISDFLYEVSAIGNAADRLSRFDEFLKRLEEEMMKIDVFKRELPLCLLLLNDAILTLREESAKLRTPISLPVLEEFIPLTKNCDQEKDDKKEKDCIDKKNWMSSVQLWNTDNHPTTNNAYDQRQHCELETKKCEDGGQSVPEDPFQSCRKSDNGCRAFLPFSSYSSIPVTPVTTKEEKEDSINDLSLMTPGTKNFREGSGSSGSRSGSSRAVSSSTPGLQPIIPPGHQQPQKQVARKQRRCWSPELHRRFVNALQQLGGSLAATPKQIRDLMQVDGLTNDEVKSHLQKYRLHARRTLATTAATANQSVVLRGLWMSQDQHNESSKASSSGSGSPQGPLQLAASGGAMFRTEGDSMEDDEDEKSECVSWKSHTHRPGKDV 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01664 398 FunFam Myb family transcription factor 255 313 - -
Accr1g01664 398 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 9 388 IPR044787 GO:0003700|GO:0006355
Accr1g01664 398 MobiDBLite consensus disorder prediction 338 398 - -
Accr1g01664 398 MobiDBLite consensus disorder prediction 189 259 - -
Accr1g01664 398 MobiDBLite consensus disorder prediction 204 241 - -
Accr1g01664 398 SUPERFAMILY Homeodomain-like 254 314 IPR009057 -
Accr1g01664 398 NCBIfam myb-like DNA-binding domain, SHAQKYF class 256 311 IPR006447 GO:0003677
Accr1g01664 398 Gene3D - 255 312 - -
Accr1g01664 398 MobiDBLite consensus disorder prediction 381 398 - -
Accr1g01664 398 MobiDBLite consensus disorder prediction 338 357 - -
Accr1g01664 398 Pfam Myb-like DNA-binding domain 258 309 IPR001005 -
Accr1g01664 398 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 255 313 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01664 Accr-Chr1 46399662 46401660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01664 7 334 G2-like Transcription Factor Family AT2G03500 36.872 3.71e-55 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr1g01664 Myb_DNA-binding 2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01664 - - qsa:O6P43_011684 429.483