Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01660 ATGGCTAAGCCATACTCAAATAATAAAGCCTTAGGCTGCTTCATCTTTAGCTCCCTCTTCATATCTTCTCTCTCACATTTGCTTCCATCAATTCCAATCCCAATCCCAGAGGATAGCGAATTTTCATTAGGTTTCAATGTTCAAATTAATGCCAACTTAACTTTTGAAAATGATAGGCTTAGAAACGCCCATGTTGCTCTTCAGGCATGGAAAAGTGCCATATATTCTGATCCATTGAACACACTTGAAAATTGGGTTGGTTCTGATGTTTGTTCTTATAATGGTGTGTTCTGTGCTGAAGCTCTTGATGATCCTAAATTAACTGTTGTTGCTGGAATTGATCTCAACCATGCAGATATTGCTGGTCGTCTTGTCCCCGAGTTAGGCCTCCTAACAGACATGGCTCTGTTCCATATAAACTCTAATAGGTTTTGTGGCATTGTCCCAGACAGCTTTAAGAATCTCACTCTTATGTATGAGTTTGATATAAGCAACAACAGGTTTGTTGGTGCTTTCCCTTCTGTGGTCCTTACATGGCCAGACATAAAGTATTTGGATCTTAGGTTTAATGATTTTGAAGGACCTTTGCCTCCACAACTTTTTGAGAAAGACATCGATGCTTTGTTCTTGAACAATAATCGTTTTGTTTCAACCATTCCAGAAACACTGGGGAACTCCACAGCCTCTGTTGTGACATTTGCTAACAACAAATTCTCAGGTTGCATCCCTAAATCAATTGGGAACATGGTGAACTTGAATGAGATTGTTTTCTTAGGGAATGGTCTCGGAGGTTGTTTCCCACAAGAGATTGGATTGTTGGGAAATGTGACGATTTTTGATGCCAGCCATAATGGGTTTGTTGGGACATTGCCAAACTTGTTAGGTTTGAAGAGTGTAGAGGTTATGGACATTGCACATAATAAGCTTTCTGGGTATGTGTCGGACAGTATTTGCAAGCTACCAGGGTTGACCAAATTTTCATTCTCGGATAATTACTTTAATGGGGAAGCTCAATCTTGTGTGCCTTCTTCAAGAGCAAATGTTGTTTTTGAAGATAGTAATAATTGTTTGCCTCTGAGATCAAATCAAAAGACGAGCAAGCAGTGTTTGCCAGTGGTGACTCGTCCCGTTGATTGTAGCAAGAGTTGTGGAAGCGGTGATGGCAACAGCCATACCCCATCAACACCAAAAACACCGAAGCTAGAGCCACCGGTTCATTCTTCTCCACCCACTGTCCAATCTCCTCCACCACCAGTCCACTCTCCACCTCCACCAGTCCACTCTCCACCCCCACCTGTGTTCTCTCCTCCGCCCCCAGTCCACTCTCCACCCCCGCCGGTGTTCTCTCCTCCTCCACCAGTCCACTCTCCACCCCCACCTGTGTTCTCTCCTCCGCCCCCAGTCCACTCTCCACCCCCGCCGGTGTTCTCTCCTCCGCCCCCTGTCCACTCTCCACCCCCACCGGTGTTCTCTCCTCCTCCCCCAGTCCACTCTCCACCCCCACCTGTGCACTCTCCTCCGCCACCAGTGCACTCTCCACCGCCTCCAGTCCACTCTCCACCACCGCCGGTGTTCTCTCCTCCGCCTCCAGTCCACTCTCCACCCCCACCTGCGCACTCTCCTCCGCCACCAGTGCACTCTCCACCACCGCCGGTGTTCTCTCCTCCGCCTCCAGTCCACTCTCCACCTCCACCTGTGCACTCTCCCCCGCCCCCTGTCCACTCTCCACCCCCACCGGTGTTCTCTCCTCCGCCTCCAGTCCACTCTCCACCCCCACCTGGGCACTCTCCTCCGCCACCAGTGCACTCTCCACCGCCTCCAGTCCACTCTCCACCCCCACCTGTGTTCTCTCCTCCGCCCCCATTTCACTCTCCACCCCCACCTGTGTTCTCTCCTCCGCCCCCATTTCACTCTCCACCCCCACCGGTGTTCTCTCCTCCGCCCCCTGTTCAATCTCCACCTCCACCCGTGTTCTCCCCTCCGCCACCAGTTCACTCCCCTCCACCTCCAGTCCAGTCTCCCTCACCTCCACCCGTGTTCTCTCCTCCGCCCCCAGTCCACTCCCCACCTCCACCTACGTTCTCTCCCCCACCACCAACTAGTCCTCCTCCTCCTACTCCTGTATTGTCTCCACCACCACCAGCATGGGATGATGTCATCTTGCCCCCAATCTTCGGGGCTCAATATAGTTCACCACCTCCACCGGCTATTGTTGGATATTAA 2223 0.5119 MAKPYSNNKALGCFIFSSLFISSLSHLLPSIPIPIPEDSEFSLGFNVQINANLTFENDRLRNAHVALQAWKSAIYSDPLNTLENWVGSDVCSYNGVFCAEALDDPKLTVVAGIDLNHADIAGRLVPELGLLTDMALFHINSNRFCGIVPDSFKNLTLMYEFDISNNRFVGAFPSVVLTWPDIKYLDLRFNDFEGPLPPQLFEKDIDALFLNNNRFVSTIPETLGNSTASVVTFANNKFSGCIPKSIGNMVNLNEIVFLGNGLGGCFPQEIGLLGNVTIFDASHNGFVGTLPNLLGLKSVEVMDIAHNKLSGYVSDSICKLPGLTKFSFSDNYFNGEAQSCVPSSRANVVFEDSNNCLPLRSNQKTSKQCLPVVTRPVDCSKSCGSGDGNSHTPSTPKTPKLEPPVHSSPPTVQSPPPPVHSPPPPVHSPPPPVFSPPPPVHSPPPPVFSPPPPVHSPPPPVFSPPPPVHSPPPPVFSPPPPVHSPPPPVFSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVFSPPPPVHSPPPPAHSPPPPVHSPPPPVFSPPPPVHSPPPPVHSPPPPVHSPPPPVFSPPPPVHSPPPPGHSPPPPVHSPPPPVHSPPPPVFSPPPPFHSPPPPVFSPPPPFHSPPPPVFSPPPPVQSPPPPVFSPPPPVHSPPPPVQSPSPPPVFSPPPPVHSPPPPTFSPPPPTSPPPPTPVLSPPPPAWDDVILPPIFGAQYSSPPPPAIVGY 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01660 740 PRINTS Proline rich extensin signature 392 413 - -
Accr1g01660 740 PRINTS Proline rich extensin signature 416 432 - -
Accr1g01660 740 PRINTS Proline rich extensin signature 460 485 - -
Accr1g01660 740 PRINTS Proline rich extensin signature 442 459 - -
Accr1g01660 740 FunFam Pollen-specific leucine-rich repeat extensin-like protein 1 63 361 - -
Accr1g01660 740 Pfam Leucine rich repeat N-terminal domain 66 98 IPR013210 -
Accr1g01660 740 SUPERFAMILY L domain-like 64 354 - -
Accr1g01660 740 MobiDBLite consensus disorder prediction 397 719 - -
Accr1g01660 740 Gene3D Ribonuclease Inhibitor 62 362 IPR032675 -
Accr1g01660 740 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 27 522 - -
Accr1g01660 740 MobiDBLite consensus disorder prediction 381 740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01660 Accr-Chr1 46251269 46253491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01660 1 381 Trihelix Transcription Factor Family AT3G19020 62.982 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01660 - - vvo:131634815 555.444