Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01615 ATGACATCCACCTCCACTCAGCCGCCGCCTAACTTCTTCTACAACGATCAAGAACACTCCGTCATCGTTGAGGCACTCACCAATGTCGTCGTCGGTTCCACCAGCACGATCTCCGCCACCACCTCCAGCGATCTTATCCAAGAGATTCGATTTGCTCCTACATTTGATTACTCCGATGCAGTATCGGCCACAACCTCAGCCCCAGTCGGACTCGTTCCGGCCATGACCGTCGAGACTTGCGGAGAATGCAAAATCGAAGGGTGCTTAGGTTGCAAATTTTTCCGAGAGGAGAAAAAGAAAAGCGGAGGGAAAAAGAAGACGGCGGCGACGTCGTCGTCGAAGAAGAAAAAGTACAGAGGAGTCCGTCAGAGGCCGTGGGGAAAATGGGCAGCTGAGATCCGAGATCCGAGAAGGGCGACCCGGGTTTGGTTGGGTACGTTCAATACGGCAGAGGAAGCCGCACGCGCTTACGATAATGCGGCGATTGAATTTCGCGGGCCGCGAGCGAAACTCAATTTCCCGTTTCCTGATAACTCGTTGAGTGATTCGCATTCCCAAACAGAGCAAGTGGAACGCTCAGAGTCAGGAATGGAGCAAGCAGAGGAAGGAAATAGAAATTCAAATCCTGAGAATTACTGTGACGATGTATGGACGATGGGAATTGGGAATAGTAAGGAAAATGAATTCTTTGATGGACTTGGAGACCCAGAATTTCAGCAATGGATGACGATGATGATGGATTTTGGAGGGGATTCTTCGGACTCTGCTACCACTAATAGCCAGAGTCCTCATAGTTGGTGA 801 0.5044 MTSTSTQPPPNFFYNDQEHSVIVEALTNVVVGSTSTISATTSSDLIQEIRFAPTFDYSDAVSATTSAPVGLVPAMTVETCGECKIEGCLGCKFFREEKKKSGGKKKTAATSSSKKKKYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTAEEAARAYDNAAIEFRGPRAKLNFPFPDNSLSDSHSQTEQVERSESGMEQAEEGNRNSNPENYCDDVWTMGIGNSKENEFFDGLGDPEFQQWMTMMMDFGGDSSDSATTNSQSPHSW 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01615 266 PANTHER DNA-BINDING DOMAIN 98 204 IPR044808 GO:0003700|GO:0009873
Accr1g01615 266 SMART rav1_2 117 180 IPR001471 GO:0003700|GO:0006355
Accr1g01615 266 MobiDBLite consensus disorder prediction 250 266 - -
Accr1g01615 266 SUPERFAMILY DNA-binding domain 117 175 IPR016177 GO:0003677
Accr1g01615 266 CDD AP2 116 174 IPR001471 GO:0003700|GO:0006355
Accr1g01615 266 ProSiteProfiles AP2/ERF domain profile. 117 174 IPR001471 GO:0003700|GO:0006355
Accr1g01615 266 MobiDBLite consensus disorder prediction 173 212 - -
Accr1g01615 266 FunFam Ethylene-responsive transcription factor 2 116 175 - -
Accr1g01615 266 PRINTS Ethylene responsive element binding protein signature 118 129 IPR001471 GO:0003700|GO:0006355
Accr1g01615 266 PRINTS Ethylene responsive element binding protein signature 140 156 IPR001471 GO:0003700|GO:0006355
Accr1g01615 266 MobiDBLite consensus disorder prediction 242 266 - -
Accr1g01615 266 Gene3D AP2/ERF domain 116 175 IPR036955 GO:0003700|GO:0006355
Accr1g01615 266 Pfam AP2 domain 117 166 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01615 Accr-Chr1 45668484 45669284 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01615 111 174 AP2-EREBP Transcription Factor Family AT2G33710 78.125 4.92e-31 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr1g01615 AP2 5.1e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01615 - - pcin:129293970 409.068