Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01603 ATGCTCCGTGGGATTGCCTTTTCCTCTTTTGGGCTTCTGGCCATCTTGGCAGTGCAGCTTCCTGCAATAATGGCTGATTGCCCTTTGGATTTGAGTACTTCAAACTTTACAATGGCATCCACTGTCTGCTCAGAACAAAGCGACAGAAACAGCTGTTGTCGCTTCATTAATGCTAATATTGCCGTTTCTGTTGCTCGATATGCAAATGAAACAGCCAACCTTGGAGTCCCTCCTGATGCTTCTGTCTTCTGCCTCCAGACCATAACTGAGACCTTGCAACTTTATGGAGTTTCACCAAATGCAGCTGTTTTCTGTGGTTTTGGGACAAAAGTCCCTGTTGATTATGAGTGTAAAGGTCGAACTACTGTCACACAGATGCTGCAATCTCCCAGATTTGGAGAGGTCACTGAGAACTGCAAATTGCCTCTTGTAAAGGAAAGTGACTGCAAGAAATGTTTGAATACTGCCATTGGTTACCTACATAATATAATCGGTGTACAAGATAATATCACATTGAGTACATGCCGTGATGCCACTTTTACTGCATTGGCAAGCCAAGTTGATGATATGTCTACTATTGAAATTGCAAGCTGTTTCTTTGGGGTTCAAGGACTTCTCGGGCCTACTGAGTCAGAGCCATCCACTTCAACTCCTGAGGCTTCTCCGAGTCCTCCTGCTGCTGATAGCCCAAATCCATTGCAATTAGTCGTTGCGGTCATGATGCTCATAGTCTTGGTTGTTTTAATTCGTCGAAAAAGCAGAGAGCTAGAGGGTCCTGATCATTTAAGTAAAACCTCCTCAAAATCCTTACCCCCCAGTGCAACATGGAGATTTCAGGATGGTCCTTCATCTACATTTCGAAAATTCAACTATAGCGAGATAAAGAAAGCCACAGATGATTTTAGCACTATAATTGGGCAAGGAGGATTTGGAACTGTGTATAAAGCTCATTTTAGTGATGGTCTAGTTGCAGCAGTAAAGCGAATGGATAAAGCATCAGAGCAAAAAGGGGATGAGTTCTGTAGAGAAATAGAGCTTGTTGCTCGGCTTCATCACCGCCATCTAGTTGCATTAAGAGGATTTTGCATTAAAAAACAAGAGAGGTTTCTGGTCTACGAGTACATGGAAAATGGAAGCTTGAAAGATCATCTTCATTCCCCTGGGAAAACACCTCTAAGCTGGCGAACAAGGATCCAAATTGCCATTGATGTGGCTAATGCACTGGATTACCTTCATTTCTATTGTGATCCTTCTCTCTGCCACAGAGACATTAAGTCTAGCAACATCTTACTCGATGAGAAATTTGTTGCGAAGCTAGCTGATTTTGGATTGGCACACGCTTCAAGAGATGGTTCTATATGCTTTGAACCAGTAAATACTGATGTTCGGGGAACTCCAGGTTATATGGATCCAGAATATATTGTTACCCAGGAACTCACCGAGAAAAGCGATATTTATAGTTTTGGTGTGGTATTATTAGAGATTGTAACCGGAAGACGGGCTATTCAAGATAATAAGAATCTGGTAGAATGGGCACAACCATTCATGGAATCTGAATCAAGATTGATGGAGTTAGTGGATCCCAATGTGAGGGAATCTTTTGATTTGGATCAGCTCCAAACAGTTGTCTCTATAGTAGGATGGTGCACTCAGAGAGAAGGCAGGGCAAGGCCTTCAATAAAACAGGTCCTTAGACTTCTGTATGAGACTTCAGAGCCAATGCACAGTGGATTTTTACAAGCTGTTGAAGATGAGGAATATATAGTAAATCAACAATCTGGCAGAAGAAGCAAGGGAAAATTACACAGAAATGAACCAAATTATCACAGTGGGGATGGAAGATATCTAGCTTCTTCTTCAAGTACATCCAGGTCATATTGCAGTAGAAGTTTCTTACTTGAGTCAGGATCTCCACAGTCCCCTCAAAATATTTTCTCAGTTTAA 1944 0.4192 MLRGIAFSSFGLLAILAVQLPAIMADCPLDLSTSNFTMASTVCSEQSDRNSCCRFINANIAVSVARYANETANLGVPPDASVFCLQTITETLQLYGVSPNAAVFCGFGTKVPVDYECKGRTTVTQMLQSPRFGEVTENCKLPLVKESDCKKCLNTAIGYLHNIIGVQDNITLSTCRDATFTALASQVDDMSTIEIASCFFGVQGLLGPTESEPSTSTPEASPSPPAADSPNPLQLVVAVMMLIVLVVLIRRKSRELEGPDHLSKTSSKSLPPSATWRFQDGPSSTFRKFNYSEIKKATDDFSTIIGQGGFGTVYKAHFSDGLVAAVKRMDKASEQKGDEFCREIELVARLHHRHLVALRGFCIKKQERFLVYEYMENGSLKDHLHSPGKTPLSWRTRIQIAIDVANALDYLHFYCDPSLCHRDIKSSNILLDEKFVAKLADFGLAHASRDGSICFEPVNTDVRGTPGYMDPEYIVTQELTEKSDIYSFGVVLLEIVTGRRAIQDNKNLVEWAQPFMESESRLMELVDPNVRESFDLDQLQTVVSIVGWCTQREGRARPSIKQVLRLLYETSEPMHSGFLQAVEDEEYIVNQQSGRRSKGKLHRNEPNYHSGDGRYLASSSSTSRSYCSRSFLLESGSPQSPQNIFSV 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01603 647 CDD STKc_IRAK 305 567 - -
Accr1g01603 647 Pfam Protein kinase domain 303 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01603 647 ProSiteProfiles Protein kinase domain profile. 299 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01603 647 ProSitePatterns Protein kinases ATP-binding region signature. 305 327 IPR017441 GO:0005524
Accr1g01603 647 MobiDBLite consensus disorder prediction 592 618 - -
Accr1g01603 647 PANTHER OS01G0750732 PROTEIN 162 592 - -
Accr1g01603 647 MobiDBLite consensus disorder prediction 258 277 - -
Accr1g01603 647 Gene3D Phosphorylase Kinase; domain 1 277 374 - -
Accr1g01603 647 MobiDBLite consensus disorder prediction 209 229 - -
Accr1g01603 647 FunFam Putative receptor-like protein kinase 267 374 - -
Accr1g01603 647 SMART serkin_6 299 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01603 647 FunFam Putative receptor-like protein kinase 375 575 - -
Accr1g01603 647 Gene3D Transferase(Phosphotransferase) domain 1 375 594 - -
Accr1g01603 647 SUPERFAMILY Protein kinase-like (PK-like) 279 570 IPR011009 -
Accr1g01603 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Accr1g01603 647 MobiDBLite consensus disorder prediction 263 277 - -
Accr1g01603 647 Pfam SPARK 25 163 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01603 Accr-Chr1 45489378 45493189 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01603 25 646 Receptor kinase-like Gene Family AT3G19300 57.496 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Accr1g01603 Pkinase 1.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01603 - - ahf:112715638 962.6