Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01601 ATGCTCCGTGGGATTGCCTTTTCCTCTTTTGGGCTTCTGGCCATCTTGGCAGTGCAGCTTCCTGCAATAATGGCTGATTGCCCTTTGGATTTGAGTACTTCAAACTTTACAATGGCATCCACTGTCTGCTCAGAACAAAGCGACAGAAACAGCTGTTGTCGCTTCATTAATGCTAATATTGCCGTTTCTGTTGCTCGATATGCAAATGAAACAGCCAACCTTGGAGTCCCTCCTGATGCTTCTGTCTTCTGCCTCCAGACCATAACTGAGACCTTGCAACTTTATGGAGTTTCACCAAATGCAGCTGTTTTCTGTGGTTTTGGGACAAAAGTCCCTGTTGATTATGAGTGTAAAGGTCGAACTACTGTCACACAGATGCTGCAATCTCCCAGATTTGGAGAGGTCACTGAGAACTGCAAATTGCCTCTTGTAAAGGAAAGTGACTGCAAGAAATGTTTGAATACTGCCATTGGTTACCTACATAATATAATCGGTGTACAAGATAATATCACATTGAGTACATGCCGTGATGCCACTTTTACTGCATTGGCAAGCCAAGTTGATGATATGTCTACTATTGAAATTGCAAGCTGTTTCTTTGGGGTTCAAGGACTTCTCGGGCCTACTGGTATGAATGAGTCAGAGCCATCCACTTCAACTCCTGAGGCTTCTCCGAGTCCTCCTGCTGCTGATAGCCCAAATCCATTGCAATTAGTCGTTGCGGTCATGATGCTCATAGTCTTGGTTGTTTTAATTCGTCGAAAAAGCAGAGAGCTAGAGGGTCCTGATCATTTAAGTAAAACCTCCTCAAAATCCTTACCCCCCAGTGCAACATGGAGATTTCAGGATGGTCCTTCATCTACATTTCGAAAATTCAACTATAGCGAGATAAAGAAAGCCACAGATGATTTTAGCACTATAATTGGGCAAGGAGGATTTGGAACTGTGTATAAAGCTCATTTTAGTGATGGTCTAGTTGCAGCAGTAAAGCGAATGGATAAAGCATCAGAGCAAAAAGGGGATGAGTTCTGTAGAGAAATAGAGCTTGTTGCTCGGCTTCATCACCGCCATCTAGTTGCATTAAGAGGATTTTGCATTAAAAAACAAGAGAGGTTTCTGGTCTACGAGTACATGGAAAATGGAAGCTTGAAAGATCATCTTCATTCCCCTGGGAAAACACCTCTAAGCTGGCGAACAAGGATCCAAATTGCCATTGATGTGGCTAATGCACTGGATTACCTTCATTTCTATTGTGATCCTTCTCTCTGCCACAGAGACATTAAGTCTAGCAACATCTTACTCGATGAGAAATTTGTTGCGAAGCTAGCTGATTTTGGATTGGCACACGCTTCAAGAGATGGTTCTATATGCTTTGAACCAGTAAATACTGATGTTCGGGGAACTCCAGGTTATATGGATCCAGAATATATTGTTACCCAGGAACTCACCGAGAAAAGCGATATTTATAGTTTTGGTGTGGTATTATTAGAGATTGTAACCGGAAGACGGGCTATTCAAGATAATAAGAATCTGGTAGAATGGGCACAACCATTCATGGAATCTGAATCAAGATTGATGGAGTTAGTGGATCCCAATGTGAGGGAATCTTTTGATTTGGATCAGCTCCAAACAGTTGTCTCTATAGTAGGATGGTGCACTCAGAGAGAAGGCAGGGCAAGGCCTTCAATAAAACAGGTCCTTAGACTTCTGTATGAGACTTCAGAGCCAATGCACAGTGGATTTTTACAAGCTGTTGAAGATGAGGAATATATAGTAAATCAACAATCTGGCAGAAGAAGCAAGGGAAAATTACACAGAAATGAACCAAATTATCACAGTGGGGATGGAAGATATCTAGCTTCTTCTTCAAGTACATCCAGGTCATATTGCAGTAGAAGTTTCTTACTTGAGTCAGGATCTCCACAGTCCCCTCAAAATATTTTCTCAGTTTAA 1953 0.4188 MLRGIAFSSFGLLAILAVQLPAIMADCPLDLSTSNFTMASTVCSEQSDRNSCCRFINANIAVSVARYANETANLGVPPDASVFCLQTITETLQLYGVSPNAAVFCGFGTKVPVDYECKGRTTVTQMLQSPRFGEVTENCKLPLVKESDCKKCLNTAIGYLHNIIGVQDNITLSTCRDATFTALASQVDDMSTIEIASCFFGVQGLLGPTGMNESEPSTSTPEASPSPPAADSPNPLQLVVAVMMLIVLVVLIRRKSRELEGPDHLSKTSSKSLPPSATWRFQDGPSSTFRKFNYSEIKKATDDFSTIIGQGGFGTVYKAHFSDGLVAAVKRMDKASEQKGDEFCREIELVARLHHRHLVALRGFCIKKQERFLVYEYMENGSLKDHLHSPGKTPLSWRTRIQIAIDVANALDYLHFYCDPSLCHRDIKSSNILLDEKFVAKLADFGLAHASRDGSICFEPVNTDVRGTPGYMDPEYIVTQELTEKSDIYSFGVVLLEIVTGRRAIQDNKNLVEWAQPFMESESRLMELVDPNVRESFDLDQLQTVVSIVGWCTQREGRARPSIKQVLRLLYETSEPMHSGFLQAVEDEEYIVNQQSGRRSKGKLHRNEPNYHSGDGRYLASSSSTSRSYCSRSFLLESGSPQSPQNIFSV 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01601 650 Gene3D Phosphorylase Kinase; domain 1 280 377 - -
Accr1g01601 650 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Accr1g01601 650 SMART serkin_6 302 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01601 650 PANTHER OS01G0750732 PROTEIN 171 595 - -
Accr1g01601 650 CDD STKc_IRAK 308 570 - -
Accr1g01601 650 MobiDBLite consensus disorder prediction 595 621 - -
Accr1g01601 650 Gene3D Transferase(Phosphotransferase) domain 1 378 597 - -
Accr1g01601 650 Pfam Protein kinase domain 306 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01601 650 MobiDBLite consensus disorder prediction 210 232 - -
Accr1g01601 650 SUPERFAMILY Protein kinase-like (PK-like) 282 573 IPR011009 -
Accr1g01601 650 FunFam Putative receptor-like protein kinase 378 578 - -
Accr1g01601 650 FunFam Putative receptor-like protein kinase 270 377 - -
Accr1g01601 650 ProSiteProfiles Protein kinase domain profile. 302 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01601 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Accr1g01601 650 Pfam SPARK 25 163 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01601 Accr-Chr1 45489378 45493189 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01601 25 649 Receptor kinase-like Gene Family AT3G19300 57.496 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Accr1g01601 Pkinase 1.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01601 - - ahf:112715638 967.992