Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01600 ATGCTCCGTGGGATTGCCTTTTCCTCTTTTGGGCTTCTGGCCATCTTGGCAGTGCAGCTTCCTGCAATAATGGCTGATTGCCCTTTGGATTTGAGTACTTCAAACTTTACAATGGCATCCACTGTCTGCTCAGAACAAAGCGACAGAAACAGCTGTTGTCGCTTCATTAATGCTAATATTGCCGTTTCTGTTGCTCGATATGCAAATGAAACAGCCAACCTTGGAGTCCCTCCTGATGCTTCTGTCTTCTGCCTCCAGACCATAACTGAGACCTTGCAACTTTATGGAGTTTCACCAAATGCAGCTGTTTTCTGTGGTTTTGGGACAAAAGTCCCTGTTGATTATGAGTGTAAAGGTCGAACTACTGTCACACAGATGCTGCAATCTCCCAGATTTGGAGAGGTCACTGAGAACTGCAAATTGCCTCTTGTAAAGGAAAGTGACTGCAAGAAATGTTTGAATACTGCCATTGGTTACCTACATAATATAATCGGTGTACAAGATAATATCACATTGAGTACATGCCGTGATGCCACTTTTACTGCATTGGCAAGCCAAGTTGATGATATGTCTACTATTGAAATTGCAAGCTGTTTCTTTGGGGTTCAAGGACTTCTCGGGCCTACTGGTATGAATGAGTCAGAGCCATCCACTTCAACTCCTGAGGCTTCTCCGAGTCCTCCTGCTGCTGATAGCCCAAATCCATTGCAATTAGGTGTGCCACTTAAAAGAAATCACCATAGATACCACTTGACATTAATTCCAGGTATTGGTATTGCTGTCACAGTCGTTGCGGTCATGATGCTCATAGTCTTGGTTGTTTTAATTCGTCGAAAAAGCAGAGAGCTAGAGGGTCCTGATCATTTAAGTAAAACCTCCTCAAAATCCTTACCCCCCAGTGCAACATGGAGATTTCAGGATGGTCCTTCATCTACATTTCGAAAATTCAACTATAGCGAGATAAAGAAAGCCACAGATGATTTTAGCACTATAATTGGGCAAGGAGGATTTGGAACTGTGTATAAAGCTCATTTTAGTGATGGTCTAGTTGCAGCAGTAAAGCGAATGGATAAAGCATCAGAGCAAAAAGGGGATGAGTTCTGTAGAGAAATAGAGCTTGTTGCTCGGCTTCATCACCGCCATCTAGTTGCATTAAGAGGATTTTGCATTAAAAAACAAGAGAGGTTTCTGGTCTACGAGTACATGGAAAATGGAAGCTTGAAAGATCATCTTCATTCCCCTGGGAAAACACCTCTAAGCTGGCGAACAAGGATCCAAATTGCCATTGATGTGGCTAATGCACTGGATTACCTTCATTTCTATTGTGATCCTTCTCTCTGCCACAGAGACATTAAGTCTAGCAACATCTTACTCGATGAGAAATTTGTTGCGAAGCTAGCTGATTTTGGATTGGCACACGCTTCAAGAGATGGTTCTATATGCTTTGAACCAGTAAATACTGATGTTCGGGGAACTCCAGGTTATATGGATCCAGAATATATTGTTACCCAGGAACTCACCGAGAAAAGCGATATTTATAGTTTTGGTGTGGTATTATTAGAGATTGTAACCGGAAGACGGGCTATTCAAGATAATAAGAATCTGGTAGAATGGGCACAACCATTCATGGAATCTGAATCAAGATTGATGGAGTTAGTGGATCCCAATGTGAGGGAATCTTTTGATTTGGATCAGCTCCAAACAGTTGTCTCTATAGTAGGATGGTGCACTCAGAGAGAAGGCAGGGCAAGGCCTTCAATAAAACAGGTCCTTAGACTTCTGTATGAGACTTCAGAGCCAATGCACAGTGGATTTTTACAAGCTGTTGAAGATGAGGAATATATAGTAAATCAACAATCTGGCAGAAGAAGCAAGGGAAAATTACACAGAAATGAACCAAATTATCACAGTGGGGATGGAAGATATCTAGCTTCTTCTTCAAGTACATCCAGGTCATATTGCAGTAGAAGTTTCTTACTTGAGTCAGGATCTCCACAGTCCCCTCAAAATATTTTCTCAGTTTAA 2025 0.4178 MLRGIAFSSFGLLAILAVQLPAIMADCPLDLSTSNFTMASTVCSEQSDRNSCCRFINANIAVSVARYANETANLGVPPDASVFCLQTITETLQLYGVSPNAAVFCGFGTKVPVDYECKGRTTVTQMLQSPRFGEVTENCKLPLVKESDCKKCLNTAIGYLHNIIGVQDNITLSTCRDATFTALASQVDDMSTIEIASCFFGVQGLLGPTGMNESEPSTSTPEASPSPPAADSPNPLQLGVPLKRNHHRYHLTLIPGIGIAVTVVAVMMLIVLVVLIRRKSRELEGPDHLSKTSSKSLPPSATWRFQDGPSSTFRKFNYSEIKKATDDFSTIIGQGGFGTVYKAHFSDGLVAAVKRMDKASEQKGDEFCREIELVARLHHRHLVALRGFCIKKQERFLVYEYMENGSLKDHLHSPGKTPLSWRTRIQIAIDVANALDYLHFYCDPSLCHRDIKSSNILLDEKFVAKLADFGLAHASRDGSICFEPVNTDVRGTPGYMDPEYIVTQELTEKSDIYSFGVVLLEIVTGRRAIQDNKNLVEWAQPFMESESRLMELVDPNVRESFDLDQLQTVVSIVGWCTQREGRARPSIKQVLRLLYETSEPMHSGFLQAVEDEEYIVNQQSGRRSKGKLHRNEPNYHSGDGRYLASSSSTSRSYCSRSFLLESGSPQSPQNIFSV 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01600 674 Pfam Protein kinase domain 330 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01600 674 Pfam SPARK 25 163 IPR043891 -
Accr1g01600 674 FunFam Putative receptor-like protein kinase 294 401 - -
Accr1g01600 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Accr1g01600 674 Gene3D Transferase(Phosphotransferase) domain 1 402 621 - -
Accr1g01600 674 Gene3D Phosphorylase Kinase; domain 1 304 401 - -
Accr1g01600 674 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Accr1g01600 674 SUPERFAMILY Protein kinase-like (PK-like) 306 597 IPR011009 -
Accr1g01600 674 SMART serkin_6 326 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01600 674 CDD STKc_IRAK 332 594 - -
Accr1g01600 674 PANTHER OS01G0750732 PROTEIN 162 619 - -
Accr1g01600 674 ProSiteProfiles Protein kinase domain profile. 326 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01600 674 MobiDBLite consensus disorder prediction 619 645 - -
Accr1g01600 674 FunFam Putative receptor-like protein kinase 402 602 - -
Accr1g01600 674 MobiDBLite consensus disorder prediction 210 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01600 Accr-Chr1 45489378 45493189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01600 25 673 Receptor kinase-like Gene Family AT3G19300 60.061 0.0 774
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Accr1g01600 Pkinase 2.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01600 - - ahf:112715638 1019.99