Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01588 ATGTCTGCAGATAGAGAACAAGAGAGGAAGAAGCACATGAAGGAGAAGCTAGCCATGAAACCTCCACCTCAAAAGCATAATAATGACACTTCAAACACAAGAGGGAAGGAAAAGGGTGGTGTTACTAATGGTACTGATGTAATGGATGCTGCTGAGAAGGAGAGACGTCAGAAATTCAAATCTTTGTTTGCTCAACTTCATGCTATGCTCCCTCATGTTCCCGGCCAGGCTGACAAAGTGACAGTAGTGGATGAAACAATGAACTCCATAAGAATATTGGAGCAAACTTTGAAAGACCTTGAAAAGAAGAAGCTTGAACGACTTCACTCTAGTATTGCTGGGAGTCCTACTGCTACTTCAAAAGAGGCCTTCATATCCGAACATGGAGCTTCCTCCTCATCCATTTTAAATTCACATAATGATCAAAACCCAGAAGTAAAGTTCCAAACTTGGACTTCTCCGAATGTGGCAGTCAACGTTTCTGGCCAACAAGCTCAATTCAATGTTTGCTCCGACAAGAATAATCGCTGCCTCTTCACCAAAATCTGCTCGGTTCTCGACAAGTACAAGATTGATGTTTTGTCGGCGCACATCTCATGTGACAACAATAATCGCAGGTTCTATATGTTTCAGGCTCAAATGAGCAAAGATTTGAATCAGCCTCCAACTTCGTTATCAGCAGAGGAAACATTCAAGCAAGCTGCTGCTGAAATTATTCAGCGTCTCTCTTGA 732 0.4235 MSADREQERKKHMKEKLAMKPPPQKHNNDTSNTRGKEKGGVTNGTDVMDAAEKERRQKFKSLFAQLHAMLPHVPGQADKVTVVDETMNSIRILEQTLKDLEKKKLERLHSSIAGSPTATSKEAFISEHGASSSSILNSHNDQNPEVKFQTWTSPNVAVNVSGQQAQFNVCSDKNNRCLFTKICSVLDKYKIDVLSAHISCDNNNRRFYMFQAQMSKDLNQPPTSLSAEETFKQAAAEIIQRLS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01588 243 Coils Coil 83 103 - -
Accr1g01588 243 SMART finulus 49 99 IPR011598 GO:0046983
Accr1g01588 243 MobiDBLite consensus disorder prediction 1 47 - -
Accr1g01588 243 CDD bHLH_AtbHLH_like 51 101 IPR045239 -
Accr1g01588 243 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 50 104 IPR036638 GO:0046983
Accr1g01588 243 Gene3D - 48 114 IPR036638 GO:0046983
Accr1g01588 243 MobiDBLite consensus disorder prediction 1 22 - -
Accr1g01588 243 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 8 239 IPR044278 GO:0003700|GO:0006355|GO:0009960
Accr1g01588 243 MobiDBLite consensus disorder prediction 24 39 - -
Accr1g01588 243 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 43 93 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01588 52 243 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 34.348 5.55e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr1g01588 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01588 - - pcin:129293085 225.713