Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01587 ATGTCTTCTGATAATGGTCTCTCAAAATCATCAGATGTCACAGCGGAGAATTCCTTGAGAGAAATCAGCCCAGTTGATCGTCGTCGTCAATCTCGTGCCTCATTGATGAGAAGAAATCGAAGGAAGAAGATGAGACTCTCTTTCAGAGAACTTCAAGATCTGGTCCCTTCTGTGAATCATATTAGGGCTGACAGGGCAACCATTGTTGAAGAAACTATCAAGTACATTAAAACCCTCGAACTCATGCTTGAAAAGTTGGAGAAAATGAAGAGAGAAAGACTCCCCGCGGCCGGATCTGCTGCCATGGCTATTTCACCAGTTCCACAAAACCCCATAGGATTTCAAACTTGGGTTTTTCCAAATGTGGCAGTGTACATTTGTGGCGAAAAAGCTCAGTTTAGTATGTGCTTTCCTAAGAAGGAAGACCTCTACAGTGAAATCTGTTGTGTTCTTAACAAGTATAATATTCAGATTTTAGTTGTCAGCATCTCAACTAATAATTATAGAAGCACGTATAAGATTCATACTCGTGCACAAAATAGGGAGAATTCGGAGGGAAGTTCAGAGGCATGTTCAATGGAGGAGACATTCAAGAAAGCGGCAAGAGACATTTATCTTCTCTCTCCTATGTGA 633 0.4123 MSSDNGLSKSSDVTAENSLREISPVDRRRQSRASLMRRNRRKKMRLSFRELQDLVPSVNHIRADRATIVEETIKYIKTLELMLEKLEKMKRERLPAAGSAAMAISPVPQNPIGFQTWVFPNVAVYICGEKAQFSMCFPKKEDLYSEICCVLNKYNIQILVVSISTNNYRSTYKIHTRAQNRENSEGSSEACSMEETFKKAARDIYLLSPM 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01587 210 Coils Coil 69 89 - -
Accr1g01587 210 SMART finulus 34 85 IPR011598 GO:0046983
Accr1g01587 210 MobiDBLite consensus disorder prediction 1 31 - -
Accr1g01587 210 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 28 79 IPR011598 GO:0046983
Accr1g01587 210 Pfam Helix-loop-helix DNA-binding domain 30 80 IPR011598 GO:0046983
Accr1g01587 210 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 37 206 IPR044278 GO:0003700|GO:0006355|GO:0009960
Accr1g01587 210 CDD bHLH_AtbHLH_like 48 87 IPR045239 -
Accr1g01587 210 Gene3D - 22 99 IPR036638 GO:0046983
Accr1g01587 210 MobiDBLite consensus disorder prediction 1 18 - -
Accr1g01587 210 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 28 102 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01587 38 206 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 26.106 2.26e-21 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr1g01587 HLH 2.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01587 - - pcin:129293081 186.037