Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01563 ATGGACACTATCACCTTCTCTTTCTCTGTCCTTTCATTCTTATTATTATCTTCTTCCTTCCTTCACTCTTCACTCTCTGTTTTTTCTGCAGAGCTTCCTCGCTCTGAAAGAGAAGCATTACAGTGCATCGACGGAGAAGCAGGGGATAATGCCCCTGCTCCTTCCCCTGACGGCGGCGACAACCCTCCTCTCACCAACTGCGGATACAACCCTTCGCCGCCTCCGCCGCTTTTGTCTCTCCGTCTGCTGAAAGCACGACTTGTGCTTCTGCAATTCGCCGCCACAATCGACGACCCCACCGGCTTTACCAAAAACTGGAAGGAAGATGTCAGCCCTTGTGATTTCAGAGGAGTTAGATGTGATAAGTATCCAAATACAGAAGAGCTTGCCGTTTCAGGAATAGATTTCAACCAAGCTGGTTTCTCTCCTCGTCCAGGTTCTATCTTGGATCTCACTCTAATCCTCGGAATCCCCGAACTAACATTCTTCCATGTCAACTCCAACAACTTCACAGGATCAGTCCCCACAGAAATCATTAAATACCCTTTTTTCTTCGAGCTCGATCTAAGCAACAACAAGCTCGAAGGTCATTTCCCATGGCAAGTTCTATTTGCTGTGCAACTCACTTTCTTAGATCTGCGGTTCAATAGCCTCATTGGACCGGTCCCACCATCACTCTTCTTTCTTGATCTAGACGTCATCTTCATCAACAACAACAACTTCTTCGGATACCTTCCATGGACTTTTGGCTTCACACGGGCGAGATACCTCACATTCGCCAACAACAAGTTCATCGGACCGATCCCACGAAGCATAGGACTAGCTTCAAAAACCTTAACGGAAGTTCTGTTCTTGGGAAACCAGTTTTCTGGGTGCTTGCCTTTTGAAATTGGGTTCCTGAAAAACGCGGTAGTGTTTGATGTGAGCAAGAACTCCTTGACCGGTCCAATCCCAGAATCTTTTGCTTGCTTAGAGAAGATTCGGTTCCTGAATTTAGCTAACAACAGATTCTATGGTGCTGTGCCGGAATCTGTGTGCAAACTTCCTGGAATTCAAACTGATGGAAATTTTTCCCTGGCGGGTAACTATTTCAGTAAAGTTGGACCTGAATGTGTGAAGCTGATAAAATCGAAGGTGCTTGATGTGAGCCAGAATTGCATTAAGGACCTTCCTAATCAGAGATCTCCTGAAGAATGTGAAAAGTTTTTGTCTTGTCTGAAGCCATGTCCGAATGCGAGATCTCTTACTTATGTTCCATGTAAGAAGTACGATTATTCTAAGTACGTTGATACGGCTTCTTCGCCTCCTGCTCCTGTCACTTACGAGGCGCTCAAGCCCACACGGCATCGTTTAATGTGA 1359 0.4584 MDTITFSFSVLSFLLLSSSFLHSSLSVFSAELPRSEREALQCIDGEAGDNAPAPSPDGGDNPPLTNCGYNPSPPPPLLSLRLLKARLVLLQFAATIDDPTGFTKNWKEDVSPCDFRGVRCDKYPNTEELAVSGIDFNQAGFSPRPGSILDLTLILGIPELTFFHVNSNNFTGSVPTEIIKYPFFFELDLSNNKLEGHFPWQVLFAVQLTFLDLRFNSLIGPVPPSLFFLDLDVIFINNNNFFGYLPWTFGFTRARYLTFANNKFIGPIPRSIGLASKTLTEVLFLGNQFSGCLPFEIGFLKNAVVFDVSKNSLTGPIPESFACLEKIRFLNLANNRFYGAVPESVCKLPGIQTDGNFSLAGNYFSKVGPECVKLIKSKVLDVSQNCIKDLPNQRSPEECEKFLSCLKPCPNARSLTYVPCKKYDYSKYVDTASSPPAPVTYEALKPTRHRLM 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01563 452 Gene3D Ribonuclease Inhibitor 249 417 IPR032675 -
Accr1g01563 452 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 11 435 - -
Accr1g01563 452 MobiDBLite consensus disorder prediction 45 70 - -
Accr1g01563 452 Pfam Leucine rich repeat N-terminal domain 86 121 IPR013210 -
Accr1g01563 452 Gene3D Ribonuclease Inhibitor 85 248 IPR032675 -
Accr1g01563 452 SUPERFAMILY L domain-like 84 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01563 Accr-Chr1 44956055 44957413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01563 81 404 Leucine-rich Repeat extension Gene Families AT3G24480 40.729 9.42e-68 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01563 - - gmx:100781083 459.914