Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01562 ATGGACACCATATCTTTCTCTGTTCTTTCATTCTTATTACTATCTTCTTCCTTCTTCCACTCTTCATTCTCAGCTTTTTCTTATGACCACCCTCCTCCTGCCTACTACTACCACCACCCGCCGCCCCCTCCGCCGTTGACCCGGCTGGAGAGAGCACGCCGTGTTCTTCTGAAATTCGCCGACACAATCGACGACTCCAATGACTTTACCAAGAACTGGCATGGTTCCGACCCGTGTGAGTTCAGAGGAGTTAAATGTGCTAACTATCCAAATTCAAAGGAGCAAGCCGTTTCAGGATTAGATTTCAACCAAGCTGGCTTCTCTGCTCGTCAAGGTTCAAACTTGGGCCTCACCGGAATCCTAGATTCCATTCCAGAATTAGCGTTCTTCCATGTCAACTCCAACAATTTCTCTGGACAAATTCCCACACAAATCACTAGGTTCCCATATTTCTACGAGCTCGACTTAAGCAACAACCAGCTCCAAGGTGAATTCCCAAGAGATGTTCTTTCTTCAAAGCAACTACTTTTCGTTGATCTCAGGTACAATAAACTCACTGGACCAGTCCCTCCAGAACTATTCAACATGGATCTAGACGTCATCTTCATCAACAACAACAAATTCAGCAGCAACCTTCCATGGAATTTCGGAAGCACACCTGCTAGATACCTCACATTCGCCAACAACAAATTCACAGGACCACTCCCAAGTAGCATAGGAAATGCGTCAAAAACCTTAACCGAAGTTCTGTTCTTGAAAAACCAATTTTCTGGGTGTTTACCATACGAGATCGGGTTCCTGAAAAAGGCCATAGTCTTCGATGTGAGCAACAACTTGTTGACGGGTCCAATCCCAGAATCTTTCGCTTGCTTAAACAAGATTCGGTTCTTGAATTTAGCTCACAACAAATTCTATGGTCCTGTTCCAGAATCAGTGTGCGAGCTTTCTGGGATTCGCAACGATGGGAATCTTACGTTAACGGATAATTATTTCACTGAAGTTGGACCTAAATGCATGAAGCTGATAAAATCGAAGGTGCTTGAAGTGAGCGGGAATTGCATAGAGGGGCTTCCCAATCAGAAATCACACGAAGAATGTTACAAGTTTTGGTCTTACGTGAAGCCATGTCCCAATGAATGGTCCCTCAAGGTTGTTCCATGCAAGAAACACGATCCCAAGTACGATGAAACGGCTCCGGCTCCTGCGCCTGTGACCTACGAGTCTCTGAATCCGACACGACACGTTTAA 1248 0.4519 MDTISFSVLSFLLLSSSFFHSSFSAFSYDHPPPAYYYHHPPPPPPLTRLERARRVLLKFADTIDDSNDFTKNWHGSDPCEFRGVKCANYPNSKEQAVSGLDFNQAGFSARQGSNLGLTGILDSIPELAFFHVNSNNFSGQIPTQITRFPYFYELDLSNNQLQGEFPRDVLSSKQLLFVDLRYNKLTGPVPPELFNMDLDVIFINNNKFSSNLPWNFGSTPARYLTFANNKFTGPLPSSIGNASKTLTEVLFLKNQFSGCLPYEIGFLKKAIVFDVSNNLLTGPIPESFACLNKIRFLNLAHNKFYGPVPESVCELSGIRNDGNLTLTDNYFTEVGPKCMKLIKSKVLEVSGNCIEGLPNQKSHEECYKFWSYVKPCPNEWSLKVVPCKKHDPKYDETAPAPAPVTYESLNPTRHV 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01562 415 MobiDBLite consensus disorder prediction 395 415 - -
Accr1g01562 415 Gene3D Ribonuclease Inhibitor 221 372 IPR032675 -
Accr1g01562 415 SUPERFAMILY L domain-like 51 355 - -
Accr1g01562 415 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 7 399 - -
Accr1g01562 415 Pfam Leucine rich repeat N-terminal domain 52 86 IPR013210 -
Accr1g01562 415 Gene3D Ribonuclease Inhibitor 49 220 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01562 Accr-Chr1 44950665 44951912 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01562 48 376 Trihelix Transcription Factor Family AT1G12040 39.759 2.05e-76 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01562 - - gmx:100795489 504.982