Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01560 ATGGACTCCATCTCTTACTTTATCCTTTCGCTCTTACTATCTTCTTCCTTCCTTCACTCATCACTACCCTCAGCTTTCTCTACAGAAATCCCTCACTCTGAAAGAGAAGCATTAGAGATCATCATCGGCGGAGGAGGAGCCCCTTCTCCTCCCGCCAACTGCCCCCCTCCCCCTCCGTCGCTGTCCCAACGGCTGTTGAAAGCACGCAAAGTGCTTCTGAATTTCAAAGCCACAATAGAAGACCCAAATTGCTTCACTAGCAACTGGCAGAAAGATGTCAGCCCTTGTAACTACACCGGTATTAAATGTGCCACTTACCCTAATTCGAAAGAGCTTGCCGTTGCAGGATTAGATTTCAACCAAGCTGGTTTTTCTGGTCGTCAAGGTTCAAAATTGTGTCTTTCAGGAATCTTGGAAAACATTCCAGAATTAACATTCTTCCATGTCAACTCCAACAATTTCTCTGGACAAATCCCCACAGAAATCATGAAGTTCCCATTTTTCTTCGAGCTCGACCTAAGCAACAACAAGCTCCAAGGTTATTTCCCAATGGAAGTTCTTTCAAATAGCCAGCTACTTTTCTTAGATCTCAGGTTCAATAGCCTCACTGGACCAATCCCTCCAAAGCTATTCACCATGGATCTAGACGTCATCTTCATCAACAACAACAAATTCAGCAGCAACCTTCCATGGAATTTCGGAAACACACCTGCGAGATACCTCACATTCGCCAACAACAAATTCACAGGACCAATCCCAAGTAGCATAGGAAAGGCGTCAAAAACCTTAACCGAAGTTCTGTTCTTGGGAAACCAGTTTTCTGGGTGTTTGCCTTACGAGATTGGGTTGCTGAAAAAGGCCACAGTCTTCGATGTGAGCAGCAATTTGTTGACGGGTCCAATCCCAGAATCTTTCGCCTGCTTACAGAAGATTCAATTCTTGAATCTAGCTAAGAACAAATTCTACGGCTCTGTTCCAGAATCTGTGTGCAAGCTTCCCGGGATTCGAAACAATGGGAATCTTACGTTGGCGGGAAATTATTTCACTTACGTTGGACCTGAATGTAAGAAGCTGATAGCTTCGAAGGTGCTTGATGTGAGGCAGAATTGCATAAAGGGACTTCCTAATCAGAAATCGCCACAAGAATGTTACAAGTTTCTATCTTGTGTGAAACATTGTCCGAATGAATGGTCTCTTAAGGTTGTTCCGTGCGAGAAAGGCTATTCTGAGTACGAAGAAACGGCGTCGCCTCCTACTGCGCCTGTGACGTATGAGTCTCTGAAGCCGACACGACATCGTTTAATGTGA 1308 0.4472 MDSISYFILSLLLSSSFLHSSLPSAFSTEIPHSEREALEIIIGGGGAPSPPANCPPPPPSLSQRLLKARKVLLNFKATIEDPNCFTSNWQKDVSPCNYTGIKCATYPNSKELAVAGLDFNQAGFSGRQGSKLCLSGILENIPELTFFHVNSNNFSGQIPTEIMKFPFFFELDLSNNKLQGYFPMEVLSNSQLLFLDLRFNSLTGPIPPKLFTMDLDVIFINNNKFSSNLPWNFGNTPARYLTFANNKFTGPIPSSIGKASKTLTEVLFLGNQFSGCLPYEIGLLKKATVFDVSSNLLTGPIPESFACLQKIQFLNLAKNKFYGSVPESVCKLPGIRNNGNLTLAGNYFTYVGPECKKLIASKVLDVRQNCIKGLPNQKSPQECYKFLSCVKHCPNEWSLKVVPCEKGYSEYEETASPPTAPVTYESLKPTRHRLM 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01560 435 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 12 417 - -
Accr1g01560 435 Pfam Leucine rich repeat N-terminal domain 69 103 IPR013210 -
Accr1g01560 435 Gene3D Ribonuclease Inhibitor 66 238 IPR032675 -
Accr1g01560 435 MobiDBLite consensus disorder prediction 411 435 - -
Accr1g01560 435 Gene3D Ribonuclease Inhibitor 239 395 IPR032675 -
Accr1g01560 435 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 237 325 - -
Accr1g01560 435 SUPERFAMILY L domain-like 67 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01560 Accr-Chr1 44928429 44929736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01560 64 388 Leucine-rich Repeat extension Gene Families AT4G13340 44.343 1.65e-78 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01560 - - gmx:100781083 496.893