Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01559 ATGGATACAGAGCCTGCTGATGCATCGAAATTGCCTCCTACTATAGATCCATCTACTTCACCTTCTGTAAAAGATCATGAAGGACAAACTTCTCCCCATGTGGTCTCTGGGAAAGAAAATTCTTCTCATGTGACATCACCTACGCAATCTTCCACTGGCATTTCGTCATGGGCTAGAAATTTGAAAATTTCCCAGTCATTTTCTGGCTCTCATGATGATTCAGCAAGTGAAAATTCTGGGAAATCTACTTTTGCACGCTTCACTAATAATTTAGCAATGCGGTTGTCTCCAAAACCACCTTCGCCAGATGGAAGCTCCAATGAAGCCTCTGCTCAGTCTAATTTGATTGAAAGTTTTGCAAAGGGTCTGGTTGACTCTTCTAAAAATGCTGTGAAAGCTGTGCAGGTCAAGGCTCGACATGTTGTGTCTCAAAATAAACGTCGATACCAGGAGGGAGGATTTGATCTAGATATGACATATATCACGGAAAACATTATAGCTATGGGATTTCCTGCTGGTGACATGAGCTCTGGGTTCTTTGGTTATGTAGAAGGGCTTTACAGAAATCATATGGAAGAAGTGATTAAGTTTTTTGAAACCCAACATAAGGGTAAATACAAAGTATACAATCTTTGTTCTGAGCGGCTCTATGATGCATCCTTATTTGAGGGGAAGGTGGCTAGTTTCCCATTTGATGACCATAATTGCCCACCAATGCAACTGATTATATCATTTTGTCAAAGTGCTTACGCATGGTTGAAGCAAGACATTGAGAATGTTGTGGTTGTCCACTGTAAAGCTGGAATGGCTAGGACGGGGTTGATGATTTCTAGTCTTCTATTATTCTTGAAGTTCTTCCCAACTGCTGAGGAGTCCATTGATTACTACAACCAGAAAAGGTGTTTTGATGGAAAAGGACTTGTTCTGCCAAGTCAGATTAGATATGTCAAATATTTTGAACGTGTCTTGACTTATTTCAATGGCGAAAATCCTCCTGCCCGCAGGTGCATGCTCAGGGGATTCCGACTTCACAGGTGCCCTTACTGGATCAGGCCTTCTATAACTGTCTCAGATCATAGTGGTGTCTTGTTCTCAACTAAAAAGCATCCAAGAACCAAGGATCTTAATCCAGAGGATTTTTGGTTCAGTGCACCTAAGAAAGGAGTGATGGTCTTTGCATTGCCTGGGGATCCTGGTCTTACAGAGGTAGCTGGGGACTTCAAAATTCATTTTCATGATCGGCAAGGAGATTTTTACTGTTGGTTGAACACAACTATGACTGAAAACAGGAAAATATTGAATACCAGTGATCTTGATGGTTTTGACAAGAGAAAATTACCTTCACCTGGATTCCTAGTTGAGGTTGTGCTTGCGGATTATGATGGCAACGTCACGACATCCAAACCTGAAACTGTTCCCAATACAAGAGATGAGAGGTCAAGTAGTATCCCGACCCCAGTTGATGCGAGCACCACAGCCCCAAAAGCTGAAAAAGGGTCGGAGAATCGCAATAAAGAGGATGATGTATTTTCAGATGGTGAGTCAGAGGATTCTACTTCAAGAAGCAGGCAGGCAAGAGCAGTTACTAATCCTAATTCTACCACTGGATCAGAGTCTAAAACTTCAAGTGAGATGAAAAGCATAGCGCATGCCACTGAACAAATTTCTTTAGGACCCACAAGCGCAACTCCAATTCCTAGTGGTAGTAAGCCAAAAGGTGAAGACGCAAGAACAGTATCGAGTGTGGAAACTCCGAGCTCAGAAAGTGAATTTAAGGCAATGGCTGCAGATGCTTCTGTATTTACGTTTGGGGATGAAGACGACTATGAAAGTGAGTGA 1839 0.422 MDTEPADASKLPPTIDPSTSPSVKDHEGQTSPHVVSGKENSSHVTSPTQSSTGISSWARNLKISQSFSGSHDDSASENSGKSTFARFTNNLAMRLSPKPPSPDGSSNEASAQSNLIESFAKGLVDSSKNAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGLYRNHMEEVIKFFETQHKGKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPMQLIISFCQSAYAWLKQDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESIDYYNQKRCFDGKGLVLPSQIRYVKYFERVLTYFNGENPPARRCMLRGFRLHRCPYWIRPSITVSDHSGVLFSTKKHPRTKDLNPEDFWFSAPKKGVMVFALPGDPGLTEVAGDFKIHFHDRQGDFYCWLNTTMTENRKILNTSDLDGFDKRKLPSPGFLVEVVLADYDGNVTTSKPETVPNTRDERSSSIPTPVDASTTAPKAEKGSENRNKEDDVFSDGESEDSTSRSRQARAVTNPNSTTGSESKTSSEMKSIAHATEQISLGPTSATPIPSGSKPKGEDARTVSSVETPSSESEFKAMAADASVFTFGDEDDYESE 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01559 612 ProSiteProfiles Phosphatase tensin-type domain profile. 147 326 IPR029023 -
Accr1g01559 612 ProSiteProfiles C2 tensin-type domain profile. 333 460 IPR014020 -
Accr1g01559 612 MobiDBLite consensus disorder prediction 498 521 - -
Accr1g01559 612 MobiDBLite consensus disorder prediction 522 567 - -
Accr1g01559 612 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 261 300 IPR000387 GO:0016311|GO:0016791
Accr1g01559 612 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 160 328 IPR029021 -
Accr1g01559 612 MobiDBLite consensus disorder prediction 13 57 - -
Accr1g01559 612 MobiDBLite consensus disorder prediction 463 593 - -
Accr1g01559 612 CDD PTP_PTEN 157 321 IPR045101 GO:0016791
Accr1g01559 612 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 132 329 - -
Accr1g01559 612 Gene3D Protein tyrosine phosphatase superfamily 132 329 IPR029021 -
Accr1g01559 612 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 124 568 - -
Accr1g01559 612 MobiDBLite consensus disorder prediction 1 57 - -
Accr1g01559 612 SMART PTEN_C2_2 331 459 IPR014020 -
Accr1g01559 612 MobiDBLite consensus disorder prediction 464 489 - -
Accr1g01559 612 ProSitePatterns Tyrosine specific protein phosphatases active site. 263 273 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01559 Accr-Chr1 44897555 44901791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01559 36 612 Protein tyrosine phosphatase (PTP) family AT3G19420 68.089 0.0 826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01559 K01110 - gmx:100784003 943.725