Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01557 ATGGCTTTTCAAGATTCTTCCTTTCTCCTCGATTCTCTCTACTGTCATGAGCCCAAATTGGAGGACGAACAAGACCAACCTTCAGAGTCTTCATATGAAACTGATCTTACCAACAACAACAGTAATGCTTCTCTGTTTCCTCTGCTTCTCTTGGAGCAAGATTTGTTCTGGGAAGACGATGACCTCATCTCTCTTTTCACCAAAGAACAGCGACAGCTTCAAGAAGCTTCTTCTTCCTCCTTCAATCCACAATTTTTGGACTCTTCTCTCTCCTTGGCTCGTCTTGAAGCAGTGGAGTGGATTCTTAAGGTGAATGCTCACCATGGCTTCTCTGCTCTTACTTCAACTCTGGCCATTAATTATTTGGATAGATTCATTTTAAGCTTCAATATTGAAATAGAGAAGCCATGGATGATCCAACTGGTTGCTGTCACTTGTCTCTCTTTAGCTGCTAAGGTTGAAGAGACACATCTCCCTCCTCTTCTAGACCTTCAAGTGGAGGATAATACTACTCGGTATGTGTTTGATGGCAAGACGATTCTGAGAATGGAGCTTCTGGTTCTGTCGACCCTGAAATGGAAGATGCACCCAGTGACGCCATTATCGTTCTTAGATCACATCATTAGAAGGCTTGGATTGAAAACCCATCTTCACTGGCAATTTCTAAAGCGTTGTGAGCATCTTCTTCTATCAGCACTCTCAGATTCAAGATTTGTGGGCTGTCTTCCTTCTGTATTGGCCACAGCCACAATGCTTCGTGTTATAGAGCAGATAGAGCACAATGATGCAGCCGAGTACAAAAAACAACTCCTGGGTGTGCTTAAAATGAACAAGGAGAAAGTAGAGGAGTGTTATAAGGCAATTCTCGAGGCGTCTGATGGTAAGGATAAAAAGAAGAGAAAGTATGGAGAGAGAGTAATGGAGGGTGGATTTGGGAGTGATGAAGGATCCAACGGTTGGTGGAAAGTGGGGTCATCTTCATCATTATGTTGTTCGCCACCACCAGAGTCTCTGTTGAAGAGGAACAGACATCATCCGCAGCAGCAGCAGCAGCAGCAACGTAATAATATGCAGATAACTCCACTGAATCGGGTTGGGGTTGCAATTGTTGTCTCATCTCCTTGA 1125 0.4382 MAFQDSSFLLDSLYCHEPKLEDEQDQPSESSYETDLTNNNSNASLFPLLLLEQDLFWEDDDLISLFTKEQRQLQEASSSSFNPQFLDSSLSLARLEAVEWILKVNAHHGFSALTSTLAINYLDRFILSFNIEIEKPWMIQLVAVTCLSLAAKVEETHLPPLLDLQVEDNTTRYVFDGKTILRMELLVLSTLKWKMHPVTPLSFLDHIIRRLGLKTHLHWQFLKRCEHLLLSALSDSRFVGCLPSVLATATMLRVIEQIEHNDAAEYKKQLLGVLKMNKEKVEECYKAILEASDGKDKKKRKYGERVMEGGFGSDEGSNGWWKVGSSSSLCCSPPPESLLKRNRHHPQQQQQQQRNNMQITPLNRVGVAIVVSSP 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01557 374 MobiDBLite consensus disorder prediction 332 359 - -
Accr1g01557 374 SMART cyclin_7 202 290 IPR013763 -
Accr1g01557 374 SMART cyclin_7 99 189 IPR013763 -
Accr1g01557 374 SUPERFAMILY Cyclin-like 57 196 IPR036915 -
Accr1g01557 374 Gene3D - 87 196 - -
Accr1g01557 374 Gene3D - 197 288 - -
Accr1g01557 374 CDD CYCLIN_AtCycD-like_rpt1 93 193 - -
Accr1g01557 374 CDD CYCLIN_AtCycD-like_rpt2 198 288 - -
Accr1g01557 374 Pfam Cyclin, C-terminal domain 198 301 IPR004367 -
Accr1g01557 374 Pfam Cyclin, N-terminal domain 88 195 IPR006671 -
Accr1g01557 374 SMART Cyclin_C_2 198 314 IPR004367 -
Accr1g01557 374 PANTHER CYCLINS 56 292 IPR039361 -
Accr1g01557 374 MobiDBLite consensus disorder prediction 344 359 - -
Accr1g01557 374 FunFam CYCLIN D32 197 286 - -
Accr1g01557 374 FunFam D6-type cyclin 78 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01557 Accr-Chr1 44842881 44844274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01557 4 290 Core Cell Cycle Gene Families AT4G34160 56.794 7.86e-108 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01557 K14505 - gmx:547740 409.838