Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01555 ATGTCATCGTTTTCAGTGGGGACTTGCTTGTTTCCATCCCAACATCTTCAGAATCTCACAGTTCAACCTTTAGCTCATGGCATTCGTACTGTCAATTATACAATATCAACTCGACTCCTTTTTGGCCCCTCTTCTTGTAGGACCAGACTTCCTAGGTTGTTGGGTGATAATGTATTGGCACGTGCTGAAAAAAAGGCCAGAGGTCCTACTTCGTCCTCTCAGCCGCCTCAAATTACTGAATCACAATCTGAGGACCGGACGCCAGAACCCAGTACTCATGATCCCTTGTGTTCACTTGACAAAACTAGCTCACAAGATTTTGAAGGCAGAAACCAGTCCAAGACTGACTTGCTTAAAGCTCTTGCAATATTTGCAGCAGCTGCAACTGGAGTGGTGGCAATTAACCAATCTTGGGTAGCTGATAATCAGGATCTTGCTATGGTATTGCTGTTTGGAATAGGATATGCAGGCATCATATTTGAAGAATCTCTAGCCTTTAATAAAAGTGGAGTAGGACTGTTGATGGCTGTAAGTCTATGGGTGATACGCAGTATTGGGGCTCCTTCAACTGATATAGCTATTTCAGAGTTGACTCATGCATCTGCAGAAGTCAGTGAAATAGTGTTTTTCTTGCTTGGCGCCATGACCATTGTTGAGATAGTTGATGCTCATCAAGGATTTAAACTGGTTACTGACAATATAACAACTCGAAAGCCACGCCTTCTTCTGTGGGTGATTGGGTTTGTGACATTCTTCCTCAGCTCAGTCCTAGACAACCTGACATCTACTATAGTCATGGTTTCTCTGTTGCGGAAACTAGTGCCTCCATCCGAGTATCGAAAGATTCTTGGAGGTGTTGTCGTCATAGCTGCAAATGCTGGTGGTGCTTGGACTCCTATTGGTGATGTTACTACTACCATGCTGTGGATACATGGTCACATATCTACATTGCCAACAATTAAGGGTTTGTTTGTACCTTCGGCCATTTCTCTAGCTCTTCCTCTGGCTCTTTTGTCATTGACTAGTGAAGTTAATGGGAAGGGATGTGATTCTCCCAGCGCCTTGACATCTGAACAGATGGCTCCTCGAGGACGGCTTGTTCTTTCTGTGGGTATAGGAGCTTTGGTGTTTGTGCCAATTTTCAAGGCCTTAACAGGTTTACCTCCTTACATGGGGATGTTGCTTGGACTTGGAGTGCTTTGGATTCTTACTGATGCTATTCATTATGGGGAATCTGAAAGGCAGATGCTAAAAGTACCACAAGCCTTATCTAGAATAGATACTCAAGGAGCACTGTTTTTCCTCGGAATTTTATTATCTGTTAGCAGCCTGGAGGCAGCAGGGATTCTTCGAGAGATAGCAAATTACCTTGACGCTCATGTTCCAAATGTTGAGTTGATTGCAAGCGCGATTGGTATCATATCAGCAGTAATAGACAATGTTCCATTAGTTGCTGCAACAATGGGAATGTATGATCTCTCCTCCTTTCCTCAGGACTCAGAGTTTTGGCAGATGGTTGCATTTTGTGCCGGTACTGGCGGATCCATGCTTGTCATTGGCTCAGCTGCTGGAGTTGCATTCATGGGGATGGAAAAGGTGGACTTCTTTTGGTATTTACGGAAGATTAGTGGCTTTGCTTTTGCAGGCTATGCCGCTGGCATTGCTGCTTATTTAGCAGCTAATAACCTCCACATTTCTCTACCCACAACTCTTGCTGATGTTCCTTCCCTTTTGGGTTCATAA 1743 0.4412 MSSFSVGTCLFPSQHLQNLTVQPLAHGIRTVNYTISTRLLFGPSSCRTRLPRLLGDNVLARAEKKARGPTSSSQPPQITESQSEDRTPEPSTHDPLCSLDKTSSQDFEGRNQSKTDLLKALAIFAAAATGVVAINQSWVADNQDLAMVLLFGIGYAGIIFEESLAFNKSGVGLLMAVSLWVIRSIGAPSTDIAISELTHASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRLLLWVIGFVTFFLSSVLDNLTSTIVMVSLLRKLVPPSEYRKILGGVVVIAANAGGAWTPIGDVTTTMLWIHGHISTLPTIKGLFVPSAISLALPLALLSLTSEVNGKGCDSPSALTSEQMAPRGRLVLSVGIGALVFVPIFKALTGLPPYMGMLLGLGVLWILTDAIHYGESERQMLKVPQALSRIDTQGALFFLGILLSVSSLEAAGILREIANYLDAHVPNVELIASAIGIISAVIDNVPLVAATMGMYDLSSFPQDSEFWQMVAFCAGTGGSMLVIGSAAGVAFMGMEKVDFFWYLRKISGFAFAGYAAGIAAYLAANNLHISLPTTLADVPSLLGS 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01555 580 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 57 579 IPR045016 GO:0006814|GO:0015297
Accr1g01555 580 MobiDBLite consensus disorder prediction 67 85 - -
Accr1g01555 580 MobiDBLite consensus disorder prediction 62 108 - -
Accr1g01555 580 Pfam Citrate transporter 156 510 IPR004680 GO:0016020|GO:0055085
Accr1g01555 580 NCBIfam sodium:proton antiporter NhaD 172 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01555 Accr-Chr1 44792116 44798132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01555 1 580 Antiporters AT3G19490 75.214 0.0 804
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01555 - - pcin:129291986 937.947