Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01553 ATGAATCTTTACTCTAAGAAACTCCATCGCTTCTGGTGTAAGGTTTCGTTCTTTCTCGCTCTTCTTCTTCTTCCTTCTCCTCCTCCTTCCTCTGCTCTTAACACCGATGGGGTTTCTTTGCTTTCTTTCAAATACTCCATCCTCAGCGACCCCTTATCAGTTTTAGGGAGCTGGAACTACAACGACGAAAACCCATGTTCGTGGAATGGAGTTACCTGCGACGAAATCGAAAGCCCAGGTACTATGTTGAGAGTGACTTCCTTGGTTCTTCCCAACAGCCAGCTTCTGGGTTCGATTTCGGAACAACTAGGAAACATCCCATACCTTCAACGTCTAGATTTGTCCACAAATTTCCTCAATGGATCTTTGCCCAGTTCTATTTTCAACTCTTCAGAGCTTCGTGTTCTTTCGCTTGCCAACAATGTCATCTCCGGTGAGCTTCCTGAGTTGGTCGGCCAACTGAAAAATCTTCAAGTTCTTAACCTCTCCGACAATGCTTTTGGTGGATCAGTCCCAGAAAATCTCACCGGTTTGAAAAATCTGACCTTTGTTTCTTTGAGAAGCAACTACTTTTCTGGTCAAGTTCCTAGTGGGTTCAATTTTGTTCAAGTTATAGATCTGTCTTCGAATCTGCTTAATGGTTCTTTACCAAACAACTTTGGTGGGGAACGATTGAGATACTTGAATCTATCTTACAATAAGATTTCAGGAATCATTCCTCCTAAATTTGCCACACTGATTCCAGAAAACTCTACCATTGATCTTGCATTCAACAATCTGACTGGAGCAATACCAGAATCTCCGGTCCTTCTGAATCAGAAAACAGAGTATTTTGCCGGAAATGGTGATGATCTTTGTGGGAAGCCTCTGGAAAACCTATGTTCTATTCCTTCTACTCTCTCTATTCCTCCATTGAACACAACAACGACAACCACATCTTCAACACCTGCGATTGCAGTCATACCAAAAACAATCGACACAAACCCAGAAACAAACACAACAACAAACGGCTCATCGAATGGCTTAAAACCGACCACAATAGTAGCCATTGTCCTCGGAGACTTGGCCGGTATAGCGATCTTAGCCATGGCCATTTTCTTCTTTGTCTACCATCAAAGAATCACAAGAGATCAAGCCAAAGCAAAAGAAGACTCGTGTGTGGCAGTGAAACCTCTTACTAGGCTTCACTTTTCCTGCTTGAAAACCAAGGAAGACTCAACTTCATCAGAAACAACCGGGTCCGATGGGTCTGACAGCGACCATGAGAGCACTAAAATTCACATAACAACCTCGAATCTTCCAAAAGAAGTGGCTCTTGTGACCCTAGACGCAGAGACAGAGCTGGATTCAGAGACTCTGCTCAAGGCTTCAGCTTGTATGTTGGGAACAACGAGGCGTGAGAGTATAGTGTACAGAGCAGTGCTTGAAGATGGAAGGGCTTTTGCAGTAAGAAGAATCGGAGAATGTGGGTTTGAGAAAAAGAAGGATTTTGAGAATCATATGAAGATAATCGCTAAGATTCGCCATCCCAATTTGGTTAAAGTTCGTGGATTTTGCTGGGGAGAGGATGAGAAGCTCGTGATCTGTGATTATATTCCCAATGGAAGTCTTGCGAGTAGCTTCAGTCACAGAAGAGCAGGGTGTTCTTCACCATTGAACTGGCCATTGGAGGTAAGGTTGAAGATAGCAAAAGGAATTGCAAGAGGCTTAGCTTTTATTCACGAAAAGAAACATGTTCACGGCAACATCAAACCCAGCAACATCTTATTGAGCTCAGAAATGGAGCCTGTAATAAGCGATTTTGGGCTCGACCGTCTGAGGCCTGCCGGTTCGATGGTGAACCGGGGAAGCCAACCCGACCTCCTCCCTCATATTGGTTCATCAGGTGGGACCCACCAAATGTTGCCCTATCAAGCACCAGAGTCTCTTCTTCAGAGTGGTCAAGTCCAACAACCCAAGGCCAAGTGGGATGTGTACTCGTTTGGGATAGTGTTGTTGGAGCTTCTGAGTGGGAGGGTTTTCTCGGACCGGGAGTTAGATTGGTGGCTCAAAGAGGGCGGTTCAGTGGAAGACGGAAAAACCCGGGTCCTGAGGATGGTTGATGTGGGCATCAAGAGTGAGGTGGAAGGGAAGGAAGAAACCACATTGGTGTGCTTCAAGTTAGGGTTTCGTTGTGCCTCTCTTCAGCCTCAAAAGAGGCCGTCCATGAAAGAGGCTTTACAAATCCTAGAGAAAATCACTTATTAA 2247 0.449 MNLYSKKLHRFWCKVSFFLALLLLPSPPPSSALNTDGVSLLSFKYSILSDPLSVLGSWNYNDENPCSWNGVTCDEIESPGTMLRVTSLVLPNSQLLGSISEQLGNIPYLQRLDLSTNFLNGSLPSSIFNSSELRVLSLANNVISGELPELVGQLKNLQVLNLSDNAFGGSVPENLTGLKNLTFVSLRSNYFSGQVPSGFNFVQVIDLSSNLLNGSLPNNFGGERLRYLNLSYNKISGIIPPKFATLIPENSTIDLAFNNLTGAIPESPVLLNQKTEYFAGNGDDLCGKPLENLCSIPSTLSIPPLNTTTTTTSSTPAIAVIPKTIDTNPETNTTTNGSSNGLKPTTIVAIVLGDLAGIAILAMAIFFFVYHQRITRDQAKAKEDSCVAVKPLTRLHFSCLKTKEDSTSSETTGSDGSDSDHESTKIHITTSNLPKEVALVTLDAETELDSETLLKASACMLGTTRRESIVYRAVLEDGRAFAVRRIGECGFEKKKDFENHMKIIAKIRHPNLVKVRGFCWGEDEKLVICDYIPNGSLASSFSHRRAGCSSPLNWPLEVRLKIAKGIARGLAFIHEKKHVHGNIKPSNILLSSEMEPVISDFGLDRLRPAGSMVNRGSQPDLLPHIGSSGGTHQMLPYQAPESLLQSGQVQQPKAKWDVYSFGIVLLELLSGRVFSDRELDWWLKEGGSVEDGKTRVLRMVDVGIKSEVEGKEETTLVCFKLGFRCASLQPQKRPSMKEALQILEKITY 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01553 748 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 33 201 - -
Accr1g01553 748 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 84 745 - -
Accr1g01553 748 Gene3D Transferase(Phosphotransferase) domain 1 532 748 - -
Accr1g01553 748 SUPERFAMILY Protein kinase-like (PK-like) 468 746 IPR011009 -
Accr1g01553 748 ProSiteProfiles Protein kinase domain profile. 455 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01553 748 Gene3D Phosphorylase Kinase; domain 1 421 531 - -
Accr1g01553 748 ProSiteProfiles Leucine-rich repeat profile. 224 245 IPR001611 GO:0005515
Accr1g01553 748 Gene3D Ribonuclease Inhibitor 33 200 IPR032675 -
Accr1g01553 748 Pfam Leucine rich repeat N-terminal domain 34 74 IPR013210 -
Accr1g01553 748 Pfam Leucine Rich repeats (2 copies) 132 165 IPR025875 -
Accr1g01553 748 MobiDBLite consensus disorder prediction 405 427 - -
Accr1g01553 748 Pfam Leucine Rich Repeat 224 243 IPR001611 GO:0005515
Accr1g01553 748 FunFam Leucine-rich repeat receptor-like protein kinase 202 296 - -
Accr1g01553 748 SUPERFAMILY L domain-like 36 281 - -
Accr1g01553 748 Pfam Protein kinase domain 468 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01553 748 Gene3D Ribonuclease Inhibitor 201 296 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01553 Accr-Chr1 44766715 44769102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01553 30 746 Receptor kinase-like Gene Family AT4G37250 48.285 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Accr1g01553 Pkinase 2.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01553 - - qsa:O6P43_011768 828.55