Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01551 ATGGAGGCGTTGCAGGGAGATTTGGATCGGGTTAAGGGTCCATGGAGCCCTGAGGAGGACGAGTTGTTGAGGCAGCACGTGCAACGGCACGGCGCTCGGAATTGGTCGGCGATATGCAAGGCGATCCCTGGAAGATCGGGAAAATCATGCCGGCTCCGGTGGTGCAACCAGCTCTCACCGGATGTAGAGCGTGGCGCCTTCACTCCCGAGGAGGATGAGATCATTGTTAAGGCACACGCCGAGTTCGGAAACAAATGGGCCACCATAGCCAAGCTCCTCAACGGCCGTACGGACAACTCCATCAAAAACCACTGGAACTCGACGTTGAAGCGCAAGTACTCGTCATTGGCTGGCGACTTCGAAGATCCATCGCTCCAACCAGCGAAGAAGCTGGCCGCCGAAGATCGATCGCTGACGATCCCGCCGGTATTAGCAGGTCATTCTTACAGCCGGAGCAGCCAAACTGGATCTGATGTCAGCGATTCCGGTCATCAGGTGGCCTCAAATCCTCTAACTCTGATTCGGCATGAATCAAGACCACATGATGCGATCCTGAAGAAAGATCTGTCAACAGAACTCACTCTGTCTGTTCCTGGAGCCGATTCGAAGGAGTTACGGATGGTTAAATATTCAGGCCTTAAAGCAGAACATGAGAAGGCATCAACAGAATTGATATTATCACCAAAGAAGAAGAAGCACAGTGGAATCACGACATTTGGGCCAGAGTTACTGGCAGTGATGAAGGAGATGATTAGGGAAGAAGTGAGAAATTACATGGGGGCATTGTGA 789 0.5209 MEALQGDLDRVKGPWSPEEDELLRQHVQRHGARNWSAICKAIPGRSGKSCRLRWCNQLSPDVERGAFTPEEDEIIVKAHAEFGNKWATIAKLLNGRTDNSIKNHWNSTLKRKYSSLAGDFEDPSLQPAKKLAAEDRSLTIPPVLAGHSYSRSSQTGSDVSDSGHQVASNPLTLIRHESRPHDAILKKDLSTELTLSVPGADSKELRMVKYSGLKAEHEKASTELILSPKKKKHSGITTFGPELLAVMKEMIREEVRNYMGAL 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01551 262 MobiDBLite consensus disorder prediction 143 165 - -
Accr1g01551 262 MobiDBLite consensus disorder prediction 146 165 - -
Accr1g01551 262 Pfam Myb-like DNA-binding domain 64 108 IPR001005 -
Accr1g01551 262 Pfam Myb-like DNA-binding domain 12 58 IPR001005 -
Accr1g01551 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 58 IPR017930 -
Accr1g01551 262 ProSiteProfiles Myb-like domain profile. 7 58 IPR001005 -
Accr1g01551 262 Gene3D - 11 63 - -
Accr1g01551 262 PANTHER MYB DOMAIN PROTEIN 55 12 154 - -
Accr1g01551 262 CDD SANT 14 56 IPR001005 -
Accr1g01551 262 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Accr1g01551 262 SMART sant 63 111 IPR001005 -
Accr1g01551 262 SMART sant 11 60 IPR001005 -
Accr1g01551 262 SUPERFAMILY Homeodomain-like 9 105 IPR009057 -
Accr1g01551 262 CDD SANT 66 109 IPR001005 -
Accr1g01551 262 Gene3D - 65 136 - -
Accr1g01551 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 113 IPR017930 -
Accr1g01551 262 FunFam Transcription factor MYB44 66 112 - -
Accr1g01551 262 FunFam MYB transcription factor 12 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01551 Accr-Chr1 44731333 44732121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01551 9 259 MYB Transcription Factor Family AT5G67300 44.523 4.00e-69 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr1g01551 Myb_DNA-binding 2.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01551 K09422 - qsa:O6P43_031073 266.159