Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01536 ATGATATTCATCCAGGAAAATGATGATGGTGAAGTGAGAGGCAACAAGGAAATACAAGAACTAGAAAGTGAAGTAATGAACAAAAATATTGAAGCAAGTGAACATGAAAATCCAGAAGAACCAGAAGAATGGTTGAACCTGAGTTTAGGAGGAGGAACACAGGTACCAACAACAACAGCATCAGAATTATCAGAATCACGATCGAGATCATCACTAACAAATGCCAAGATCTTCTCATGTAACTTCTGCATGAGGAAGTTCTTTAGTTCACAGGCCTTAGGGGGACACCAGAACGCACACAAAAGGGAAAGAGGAGCTGCTAGGAGATATTATCAGACTCAGAAGACGATGATGACGACGGCGGCGATGACGATGGGTTTGTCCTTTCGATCACTCGGAGTTCAGCCTCACTCATTGGTGCACAAGCCTGGTTGCAGAGGAGGAGGAACAAGAATAGTACCACCAAGCTTTCATGGAGGAGGGGTTGGAATAATGGGATTCGAGGACTGTTGCGTGCCTCATAATGATGATGATGAAGATGATCATGTCGATTTGGTTTGGCCTGGAAGCTTCCGATTGGATCACCAAAAACAAGCTGATCAGACGCCTAAAGAATCAATCAAGCTCGATCTAGACCTTCGACTCTGA 648 0.4414 MIFIQENDDGEVRGNKEIQELESEVMNKNIEASEHENPEEPEEWLNLSLGGGTQVPTTTASELSESRSRSSLTNAKIFSCNFCMRKFFSSQALGGHQNAHKRERGAARRYYQTQKTMMTTAAMTMGLSFRSLGVQPHSLVHKPGCRGGGTRIVPPSFHGGGVGIMGFEDCCVPHNDDDEDDHVDLVWPGSFRLDHQKQADQTPKESIKLDLDLRL 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01536 215 Gene3D Classic Zinc Finger 58 130 - -
Accr1g01536 215 MobiDBLite consensus disorder prediction 50 68 - -
Accr1g01536 215 MobiDBLite consensus disorder prediction 27 42 - -
Accr1g01536 215 ProSiteProfiles Zinc finger C2H2 type domain profile. 78 105 IPR013087 -
Accr1g01536 215 MobiDBLite consensus disorder prediction 27 68 - -
Accr1g01536 215 SUPERFAMILY beta-beta-alpha zinc fingers 73 104 IPR036236 -
Accr1g01536 215 ProSitePatterns Zinc finger C2H2 type domain signature. 80 100 IPR013087 -
Accr1g01536 215 PANTHER ZINC FINGER PROTEIN 4-LIKE 16 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01536 Accr-Chr1 44278171 44278818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01536 72 215 C2H2 Transcription Factor Family AT1G80730 34.118 1.09e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01536 - - pcin:129293471 219.55