Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01517 ATGACGAGTGCTTCGGAGCTATTCTACAATCGGAGGTATCGTTTGGGACGAACCTCTGATTATCTCGGGAACGATTCGTTGCCTGATAGATACCTTCACCTCGATATCAATAACCGTCGCCATCATCACCATCTACATGATTCAAGTGATGGTGAAACTCTCCGAAGGTCCACGCCAACGCGGCGGCTATTTCATCGTCTGTCCTCCGCGGAGCGAGAATCAGCCAGACTTGATCTAAGGCATAACTGGTCTCTTTCAAACACGGCCAATTCTGCTGAAAATGTTAACAGTGTCAGGGGCCCTAGAGTGACTGGTAATGACAGGCTACCCATAGCTGTGGTACATGCAAGGGCAAGACTCCTTCAGAGGTTGAGTGCAGCACCTCCCTCCGGAAACAGGCAAAGGGGTAGAGTCTCTCTAGGTATTGATGACATGAGGCATACTAACTTCAGGGATGAAGAGAGCAGTGAATCATCAGCTACTGGTCCAGCTGAGGGTTTATTAACTAACTTAACTTTACAAATGGAAAGGACCCAACTCTCACATGAAGAGAACAAAAAACCACCTGGACTCAACCGGGAGGCCATGGATCGTTTGCATGTGGAAATCTTTGGTGTCAAGGAAACACAAACGGAAGAATTGGAATCTAGGTTACTGCAGGATTGTGGCATATGCCTAGAAACTTTTCTGGTGGGAGATAAGCTCATACGCTTGCCATGTGGACACAGATTCCACTCTGTCTGTTTGGATCCATGGGTTCGAAAATGTGGGGATTGCCCTTTCTGTAGAAGAGGTATATTTTTAAACTAG 810 0.4691 MTSASELFYNRRYRLGRTSDYLGNDSLPDRYLHLDINNRRHHHHLHDSSDGETLRRSTPTRRLFHRLSSAERESARLDLRHNWSLSNTANSAENVNSVRGPRVTGNDRLPIAVVHARARLLQRLSAAPPSGNRQRGRVSLGIDDMRHTNFRDEESSESSATGPAEGLLTNLTLQMERTQLSHEENKKPPGLNREAMDRLHVEIFGVKETQTEELESRLLQDCGICLETFLVGDKLIRLPCGHRFHSVCLDPWVRKCGDCPFCRRGIFLN 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01517 269 CDD RING-H2_PA-TM-RING 221 263 - -
Accr1g01517 269 SUPERFAMILY RING/U-box 221 267 - -
Accr1g01517 269 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 176 266 IPR013083 -
Accr1g01517 269 SMART ring_2 222 262 IPR001841 -
Accr1g01517 269 ProSiteProfiles Zinc finger RING-type profile. 222 263 IPR001841 -
Accr1g01517 269 MobiDBLite consensus disorder prediction 42 61 - -
Accr1g01517 269 Pfam Ring finger domain 221 263 IPR001841 -
Accr1g01517 269 PANTHER SI:CH211-59O9.10 66 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01517 Accr-Chr1 43943678 43945976 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01517 1 266 C3H Transcription Factor Family AT1G49850 37.918 5.99e-38 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01517 - - pcin:129293386 460.685