Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01516 ATGTCTCTCAGAAAACCTCCACTTCCACGTCTCCTCCTCAATGATGTTTCCTGCATGAGAAATGCCCAGCAAATTCTTCATCACGTGAATGTATCCCTTCATGATGGCAGTGCACTCGTTTTAACTGGTGCAAATGGCTCTGGTAAGACAACTTTCTTGCGCATGTTGGCTGGATTTTCACGCCCTTCAGCCGGAGAAATCCTTTGGAATGGCCATGACATCACACAATCTGGAATATTTCATCAGTATAAGCTTCAGCTCAATTGGCTTTCCCTCAAGGATGCCATTAAAGAGAAGTTTACAGTTCTTGACAATGTTCAATGGTTTGAAGTTCTTGAAGGCAAGCAAGGTAGGTCTTTGCCTGCGCTCGAGTTGATGGGTCTCGGAAGATTGGCTAATGAGAGGCCAAGTAGACTGTCAATGGGCCAACGGAAAAGATTGCAACTTGCCAGATTGTTGGCGATCGATCGTCCAATTTGGTTGCTTGATGAGCCGTCAGTTGCATTAGATACTGAAGGGGTGAAGCTACTCGAGTACATAATTGCAGAACATAGAAAGAATGGTGGGATTGTGATTGTGGCAACTCATTTACCAATTAAGATTGAAGATGGCATGGTCTTGAGGCTGCCTCCAAGATTTCCTAGGAGGTTGACTTTAGTGGATATGCTTGATCGTGCTGATATTTAG 687 0.444 MSLRKPPLPRLLLNDVSCMRNAQQILHHVNVSLHDGSALVLTGANGSGKTTFLRMLAGFSRPSAGEILWNGHDITQSGIFHQYKLQLNWLSLKDAIKEKFTVLDNVQWFEVLEGKQGRSLPALELMGLGRLANERPSRLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDTEGVKLLEYIIAEHRKNGGIVIVATHLPIKIEDGMVLRLPPRFPRRLTLVDMLDRADI 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01516 228 Gene3D - 8 207 IPR027417 -
Accr1g01516 228 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 228 IPR003439 GO:0005524
Accr1g01516 228 NCBIfam heme ABC exporter ATP-binding protein CcmA 13 207 IPR005895 GO:0017004|GO:0022857
Accr1g01516 228 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 196 IPR027417 -
Accr1g01516 228 SMART AAA_5 35 223 IPR003593 GO:0016887
Accr1g01516 228 Pfam ABC transporter 26 166 IPR003439 GO:0005524
Accr1g01516 228 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 6 223 IPR005895 GO:0017004|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01516 Accr-Chr1 43920361 43921047 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01516 24 178 Calmodulin-binding Proteins AT2G36910 28.655 1.40e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01516 - - tcc:18587871 395.586