Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01514 ATGAGTAAAAATATGGTTGATGTTTTGCATGAAGGGCATCAAACAGGTAGTGATCTTGTTGTTAATCCTAGAAAGGATGTTCTGTTGTATGAAGGGGACAAAGATTTTGAGCCACACAAGGGCATTGAATTTGATTCTCATGAAGCAGCATATTCATTTTATCAAGAATATGCCAAATCTATGGGATTCACCACTTCAATAAAAAACAGCAGACGTTCAAAGAAAACTAAAGAATTTATTGATGCCAAATTCGCATGCTCTAGATATGGATTTACTCCTGAGTCAGATAGTGGGAGCAGCCGAAGGCCAAGTGTAAAGAAGACAGATTGCAAAGCCTGCATGCATGTGAAGAGAAGGTCAGATGGAAAGTGGATAATTCATGAATTCATAAAGGAGCATAATCATGAACTTCTACCAGCTTTGGCGTATCATTTTCGGATTCATAGAAATGTGAAGTTAGCTGAAAAGAATAACATTGATATATTGCATGCTGTTAGTGAACGCACCAGAAAGATGTATGTCGAAATGTCTAAGCAATCCAGTGGTTGTCATAATTTTGGGTCTCTTCTCAGTGACGTAAATTGTCAGTTTGAAAGAGGCCAACATTTGGCTTTGGACGAGGGAGACGCTCGAGTTATTCTTGAGTATTTTAAGCATATTCAAAAGGAGAATCCTAACTTCTTTTATGCTATTGATTTGAATGAAGAACAACGATTGAGAAATTTGTTTTGGGTTGATGCAAAAAGTAGGAGTGATTATGTCACCTTTAATGATGTAGTTTCATTTGATACTTCTTATATCAAAAGCAATGATAAGTTGCCATTTGCTCCTTTTGTTGGAGTGAACCATCACTGTCAGCCTATATGGCTTGGATGTGCATTGGTTGCCGATGAGACCAAACCAACATTTGTTTGGTTGATGAAGACATGGCTTAGAGCAATGGGTGGGCAAGCTCCTAAAGTCATAATCACTGATCAAGACAAGGCCTTGAAGGCAGCTGCTGAAGAAGTCTTCCCAAATGCACGCCATTGCTTTTCTCTTTGGCACGTACTTGAGAGGATACCTGAAAATCTTCCTATGGTGATAAAAAGGTATAAGAATTTCTTGCCGAAGTTTAACAAGTGCATATTTAAGTCTTGGACAGATGAAGAGTTTGACATGAGGTGGTGGAAAATGGTCACTAGATTTGAACTTCAGGATGACTTATGGTTTCAGTCTTTGTACGAAGACCGGAAAAAGTGGGTGCCTACTTATATGGGGGACACCTTTTTAGCTGGAATGTCTACTGCTCAACGTTCTGAAAGTATGAACTCTTTCTTTGACAAATACATTCATAAAAAAATAACGGTTAAAGAGTTTGTGAAACAGTATGGGACAATTCTTCAGAAAAGGCATGAAGAGGAAGCGATTGCAGATTTTGATACATTGCACAAACAGCCAGCACTCAAGTCTCCTTCTCCTTGGGAAAAACAAATGTCAACAGTTTATACGCATGCGATCTTCAAGAAGTTCCAAGTTGAAGTTCTGGGTGTTGTTGGCTGTCATCCTAGGAGAGAAGGTGGAGATGGAACAATTGCGAAATTTGTAGTTCAAGATTGTGAGAAGGAGCAAGAGTTTTTGGTCACATGGAATGAGATGAACTCAGAGGTTTCTTGCTTCTGTCGATTATTTGAATATAAAGGTTTCCTTTGCAGGCATGCGTTGAATGTTCTCCAACTTTGTGGCTGTTCAAGTATCCCATCTCACTACATTTTGAAAAGGTGGACCAAAGATGCAAAAAGTAAGGTATCAATGGTAGATGGAACTGAAAGGATCCAAACTAGGGTGCAACGTTATAACGATTTGTGTAAAAAAGCTATTGAATTGAGTGAAGAAGGATCCTTATCTGAAGAGAGTTATGATGTTGTTTTCCGTGCACTTGTTGATGCCCTGAAGAATTGTGTACATGTGAATAATTCTAACAACAATAATGCAGAAACCAGCAACAATGCTCTTGCCCTACGTGAAACAGAAGAAAATCAGGTTAGCATTGCTACAAAAACAACTAAAAAGAGGACTCCAGCTAAGAGAAGAAAGGCTCAAATAGATACAGATATGATACTCGTGGACACACAAGATAGCCTGCAGCAAATGGATAACCTTAGCTCGGATGGAATGACCCTTAATGGATATTATGGCGCTCAGCAAAATGTGCAAGGACTGGTACAGTTGAACTTAATGGAGCCTCCTCATGATGGTTACTATGTTAATCAACAGAGTATGCAAGGCCTTGGCCAATTGAATTCTATGACCTCGAGCCACGACGGGTTTTTTGGGACTCAACAAAGCATTCACGGGCTGGGGCCATTGGAGTTTCGTCCGCCGACCACTTTTGGATATACACTGCAGGATGATCCTGATCTGAGGTCTGCTCAGTTTCATGCCAGCAGTTCAAGAAATACATAG 2445 0.3971 MSKNMVDVLHEGHQTGSDLVVNPRKDVLLYEGDKDFEPHKGIEFDSHEAAYSFYQEYAKSMGFTTSIKNSRRSKKTKEFIDAKFACSRYGFTPESDSGSSRRPSVKKTDCKACMHVKRRSDGKWIIHEFIKEHNHELLPALAYHFRIHRNVKLAEKNNIDILHAVSERTRKMYVEMSKQSSGCHNFGSLLSDVNCQFERGQHLALDEGDARVILEYFKHIQKENPNFFYAIDLNEEQRLRNLFWVDAKSRSDYVTFNDVVSFDTSYIKSNDKLPFAPFVGVNHHCQPIWLGCALVADETKPTFVWLMKTWLRAMGGQAPKVIITDQDKALKAAAEEVFPNARHCFSLWHVLERIPENLPMVIKRYKNFLPKFNKCIFKSWTDEEFDMRWWKMVTRFELQDDLWFQSLYEDRKKWVPTYMGDTFLAGMSTAQRSESMNSFFDKYIHKKITVKEFVKQYGTILQKRHEEEAIADFDTLHKQPALKSPSPWEKQMSTVYTHAIFKKFQVEVLGVVGCHPRREGGDGTIAKFVVQDCEKEQEFLVTWNEMNSEVSCFCRLFEYKGFLCRHALNVLQLCGCSSIPSHYILKRWTKDAKSKVSMVDGTERIQTRVQRYNDLCKKAIELSEEGSLSEESYDVVFRALVDALKNCVHVNNSNNNNAETSNNALALRETEENQVSIATKTTKKRTPAKRRKAQIDTDMILVDTQDSLQQMDNLSSDGMTLNGYYGAQQNVQGLVQLNLMEPPHDGYYVNQQSMQGLGQLNSMTSSHDGFFGTQQSIHGLGPLEFRPPTTFGYTLQDDPDLRSAQFHASSSRNT 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01514 814 Pfam MULE transposase domain 259 352 IPR018289 -
Accr1g01514 814 Pfam SWIM zinc finger 548 574 IPR007527 GO:0008270
Accr1g01514 814 SMART 26again6 550 577 IPR006564 GO:0008270
Accr1g01514 814 Pfam FAR1 DNA-binding domain 52 139 IPR004330 -
Accr1g01514 814 ProSiteProfiles Zinc finger SWIM-type profile. 539 575 IPR007527 GO:0008270
Accr1g01514 814 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 31 648 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01514 Accr-Chr1 43898347 43901372 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Accr1g01514 MULE 7.9e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01514 - - gmx:100805377 1355.5