Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01499 ATGAGTTGCAGCGGTTGTCGTGTTCTCCGAAAAGGATGCAGCAACGAGTGCATGCTCCAGCACTGCCTTCAGGGGATCCAATGCCCTCAAGCCCAAGCCCACGCCACTGTCTTCGTCGCCAAGTTCTTCGGCCGTGCCCGCCTCATGTCTCTAGTCTCCGCCGTTCCTCCCTCCCAAAGACCCCATTTGTTTCAGTCATTGTTGCATGAAGCTCTGGGACGTACCATAAACCCAGTGAGTGGAGCAGTGGGGCTTCTCAGGACAGGGAATTGGCATCTCTGCCAGATGGCAGTGGAGATGGTGCTCCGTGGCAACGCGCTGAGCCCACTTCCTCCGGATTTCTCTGTTGGTTCTGTTGCGGTGGAAGATGACGGTTTAGGGTCTGCCATAAATAGTGGTACCAATTGGAGGGACATGAAGGGAGAAAGGTCATCAATGGTGTTAAAGAGGAAGTTGATGAGTGGTTCTAATATTGATGATGACCTGAAGGATTTTGAAGCCCGTCATCAGAGGATGCCGGAGAGGGCGAAGAAGCACCGAGCGGTGACACCCTCCACGGAGGAGTCTGAAACAACAACGTTTGGGAGTGGCCTACAGCAGGGCAGTGCCCAAAGGAGGCTCCTAAAACTATTCTACTGA 639 0.5368 MSCSGCRVLRKGCSNECMLQHCLQGIQCPQAQAHATVFVAKFFGRARLMSLVSAVPPSQRPHLFQSLLHEALGRTINPVSGAVGLLRTGNWHLCQMAVEMVLRGNALSPLPPDFSVGSVAVEDDGLGSAINSGTNWRDMKGERSSMVLKRKLMSGSNIDDDLKDFEARHQRMPERAKKHRAVTPSTEESETTTFGSGLQQGSAQRRLLKLFY 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01499 212 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Accr1g01499 212 MobiDBLite consensus disorder prediction 172 199 - -
Accr1g01499 212 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 193 - -
Accr1g01499 212 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01499 Accr-Chr1 43634065 43635902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01499 1 120 AS2 family AT3G49940 68.333 8.92e-55 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr1g01499 LOB 8.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01499 - - rcu:8272260 206.838