LGRPv2

Gene search

Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr1g01449	559	ProSiteProfiles	MADS-box domain profile.	13	73	IPR002100	GO:0003677\|GO:0046983
	Accr1g01449	559	Gene3D	-	26	95	IPR036879	GO:0003677\|GO:0046983
	Accr1g01449	559	Pfam	SRF-type transcription factor (DNA-binding and dimerisation domain)	24	69	IPR002100	GO:0003677\|GO:0046983
	Accr1g01449	559	SMART	madsneu2	13	72	IPR002100	GO:0003677\|GO:0046983
	Accr1g01449	559	PANTHER	MADS BOX PROTEIN	16	150	-	-
	Accr1g01449	559	PRINTS	MADS domain signature	50	71	IPR002100	GO:0003677\|GO:0046983
	Accr1g01449	559	PRINTS	MADS domain signature	15	35	IPR002100	GO:0003677\|GO:0046983
	Accr1g01449	559	PRINTS	MADS domain signature	35	50	IPR002100	GO:0003677\|GO:0046983
	Accr1g01449	559	SUPERFAMILY	SRF-like	14	91	IPR036879	GO:0003677\|GO:0046983
	Accr1g01449	559	Coils	Coil	88	118	-	-

Showing 1 to 10 of 10 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr1g01449	Accr-Chr1	42681845	42683524	Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr1g01449	10	217	Type I MADS-box Gene Family	AT5G60440	32.701	8.27e-24	100

Showing 1 to 1 of 1 entries

Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MADS-M-type	Accr1g01449		SRF-TF	1.3e-17	No_clan

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr1g01449	-		-	pcin:129293116	460.299

Showing 1 to 1 of 1 entries