Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01446 ATGTTTCCCTCCCTAAACAGCAGAAATTTACTTCTGGTTTTGCTCTCAGTTTCTGTGTTCATCATCCCCCAAAACTCCCAGATTACCTACCTTTATAAGGCCTGTTTTGATCCACCTAGAAGCAGAGATCATGCAAAATTCGAATCCAATCTAAATTTGCTCTTGAATTCTCTGTCTTCTAAATCACACCTTCACAGCTTTTACAAAGCTTTTTCACGTAATCTTTATGGTCTCTACCTTTGCAGGGGAGATGTTTCCATTCAAACCTGTCAAAACTGTATCAAAGTTGCAACTCAAGAAATCAAAATCAAATGTGCATACCACCTTAGTGCTTTCATCTGGTATGATCAGTGCATGCTCAGATACTCTCAAAAGAGCTTCTTTGGAGTGGCACAAATTTCGCCAGGAACACTCATGTGGAATCAGAAAAATAAAACTTCAGTCAATCAACCCGATGTCGATGCACTGGCTCTGATTTACCAACTCATAAAAGAAGCCACAAATACATCTATGCTGTTCAGAGCAAACGGTTCAGAGGTGGTGACAAATAGTTCTGAGCATCGATATGGGCTTGTGCAGTGCACAAGAGACTTAAATAGTAGTTCATGCAGCTTCTGTTTGTCACAATTGGTGGTGGAAGCACAGAAGTTCAGCCAACAGAAGGCTGGTTGGCACATATTTGGTCCAAGTTGCAATATACGACATGAAAATTATATCTTCTACCAGCAAAATTGGGGACCAGATAATGCCTCTACACCACCAATGAACCAGCCAGATGATGAAGGTTCTGCAGAAGAATTCGCATACAAAGTTAGAGCCACTGTAGTTTTGCTTGTCCTAGTTGCAATGACTGCATCATTTTTGGGTTTTGCAAGCTATGTATGTTTTCACAGGAAAAGAAGACTTAGAGGGGGAGAAACAACTGATGAGATTCTGTTGCAGAAGTTGGAGATTTTGAAGAAGCACCACACTAAAGAGCAAGGAGCCACGAAAGATGAGTACAACAGTGAAGTTCAAAACTTTAGTTTTAAGACCATTAAGGTTGCTACAAACTATTTCTCAGAAGAAGCCACACTTGGGAGAGGAGGATTTGGACTCGTTTTCAAGGGGAAGTTGAGTAATGGCAAGGAGATAGCAGTTAAAAGGCTTTCATTCAAAACAGGGCAAGGCCTTGAAGAGTTCAAGAATGAAGTAACATTGATAGCAAAACTTCAACACAAGAATCTTGTGAGGCTTTTGGGATTCTGTCTGGAAGAAAATGAAAAGCTTCTAGTCTATGAATACATGCCCAACACTAGCCTTGATACCTTCTTGTTTGATTCAACAAAGCGTCAACAGCTAGATTGGTCTAAGAGGAGGAATATTATAAAGGGAGTTGCAAGAGGACTTCTGTATCTGCATGAGGACTCAAGGCTAAAAATTATTCATAGAGATCTAAAAGCAAGTAATGTGTTACTAGATGAAGAGATGAATCCAAAGATTTCGGATTTCGGAACTGCTAGAATTTTTGGCAACGATCAAATTGAGGCTAGTACTGAAAGAGTTATTGGCACATACGGATATATGGCACCCGAATATGCCTTAGAGGGATTATTTTCCATCAAATCAGACGTTTACAGCTTCGGTGTCATCATGCTAGAAGTCATCAGTGGAAAAAGAAACACTGGCTTCTACCAACCAGAACGTGGTTTAAGTCTTCTCTCCTACGCATGGCGACTCTGGAATGAAGGCAAAGGACTTGAACTTGTGGAGAGTGACTTGATCAACACTTGTGGTGATAAGGAAGAAGCTTTGAGATGGATCCATATTGGGCTTCTATGTGTTCAAGAGAACCCACAAGATAGGCCCACCATGTCAACAGTTGTTCTAATGCTGGCAAGTTCCAGCAATCTTCCTCACCCATTCGCTCCTCCATTTTCGGTCGGCAGATTCTTCGCTGCTATTCAATCCTCCTCCACAACTGTTTCCAGTAAGCAAGTTTCATGTGATTGTTGA 1995 0.41 MFPSLNSRNLLLVLLSVSVFIIPQNSQITYLYKACFDPPRSRDHAKFESNLNLLLNSLSSKSHLHSFYKAFSRNLYGLYLCRGDVSIQTCQNCIKVATQEIKIKCAYHLSAFIWYDQCMLRYSQKSFFGVAQISPGTLMWNQKNKTSVNQPDVDALALIYQLIKEATNTSMLFRANGSEVVTNSSEHRYGLVQCTRDLNSSSCSFCLSQLVVEAQKFSQQKAGWHIFGPSCNIRHENYIFYQQNWGPDNASTPPMNQPDDEGSAEEFAYKVRATVVLLVLVAMTASFLGFASYVCFHRKRRLRGGETTDEILLQKLEILKKHHTKEQGATKDEYNSEVQNFSFKTIKVATNYFSEEATLGRGGFGLVFKGKLSNGKEIAVKRLSFKTGQGLEEFKNEVTLIAKLQHKNLVRLLGFCLEENEKLLVYEYMPNTSLDTFLFDSTKRQQLDWSKRRNIIKGVARGLLYLHEDSRLKIIHRDLKASNVLLDEEMNPKISDFGTARIFGNDQIEASTERVIGTYGYMAPEYALEGLFSIKSDVYSFGVIMLEVISGKRNTGFYQPERGLSLLSYAWRLWNEGKGLELVESDLINTCGDKEEALRWIHIGLLCVQENPQDRPTMSTVVLMLASSSNLPHPFAPPFSVGRFFAAIQSSSTTVSSKQVSCDC 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01446 664 Pfam Protein tyrosine and serine/threonine kinase 356 623 IPR001245 GO:0004672|GO:0006468
Accr1g01446 664 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Accr1g01446 664 ProSiteProfiles Gnk2-homologous domain profile. 133 240 IPR002902 -
Accr1g01446 664 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 46 653 - -
Accr1g01446 664 SUPERFAMILY Protein kinase-like (PK-like) 334 625 IPR011009 -
Accr1g01446 664 Gene3D Transferase(Phosphotransferase) domain 1 429 632 - -
Accr1g01446 664 FunFam Cysteine-rich receptor-like protein kinase 10 317 428 - -
Accr1g01446 664 ProSiteProfiles Gnk2-homologous domain profile. 29 127 IPR002902 -
Accr1g01446 664 ProSiteProfiles Protein kinase domain profile. 353 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01446 664 SMART serkin_6 353 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01446 664 Pfam Salt stress response/antifungal 42 124 IPR002902 -
Accr1g01446 664 Pfam Salt stress response/antifungal 170 238 IPR002902 -
Accr1g01446 664 FunFam Uncharacterized protein 429 630 - -
Accr1g01446 664 Gene3D - 136 240 IPR038408 -
Accr1g01446 664 Gene3D - 27 127 IPR038408 -
Accr1g01446 664 CDD STKc_IRAK 359 625 - -
Accr1g01446 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Accr1g01446 664 Gene3D Phosphorylase Kinase; domain 1 327 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01446 Accr-Chr1 42626256 42629524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01446 14 634 Receptor kinase-like Gene Family AT4G05200 42.278 4.02e-169 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr1g01446 PK_Tyr_Ser-Thr 5.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01446 - - qsa:O6P43_031178 725.702