Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01440 ATGACAACAACAACTGCTATTTTCTTGGCTCTAATTTCACTCCTTTCTCATCTTCTCGTTCTCACAGCCCAGCCTGACTTCTTCTTTCACAAGTGCTTCAATGAAAGTGGTAACTACACAAAACCAAGTGCCTACCACACTAACCTCAATACCCTTCTTTCTAATTTCACTTCTGACACCAAAATTGACTATGGCTTCTACAATTACTCCAATGGTGAAACCCCAAACAGAGTTAATGCACTTGGAATGTGCAGAGGAGATGTGAAGCCAGATTCTTGTCGTAGTTGCCTCAATAATGCCATAACCCTTCTCCCAAATCTGTGTCCATATCAGAAGGAGGCATTTGGATACTATGATTTATGCATGTTTCGATACGCAAGTCGTCAAATGTTTGGGATCTACCAGGACCATGACTTTCAGAATTATTCTGGCAACCAGACTGATGCAGTAGATGCAAACAAGTACAAGGATTCGGCTATTAAACTATTGCATAGTCTAAAAGAAAGAGCTAAAGTTGGTGAAGGCTCTTATCACAAGGTGGCTGCGGGAAATGCAACAGCTGATCAATCTCAAGCTGCGTATGGTCTTGTTCAGTGCACGCCTGATTTGAATGAGCAAGATTGCTTCGACTGTTTGACGGATTCTATTTTTTATATCCCAAATTGTTGTCAGGACAAGGTCGGTGGGAGGGTAATCAAGTTGAACTGCAATATTAGATTTGAGAATTTTTTATTCTTTGATCCTGCGCATATTAATTCAGTACAATTACCTCTGTCTCCCGCTGATCTTTCTCCACCAACCGATTCAACTTCCTCGCAAGGAGGTAGCAAAAAATCAAGAACTACCGTTATTGCAGTTGTGCTGATTGGTACCCTTGTCGCCGTTCTCATATTATTCTTCATAATTAAAAGATCAAAGAAAACCCATGGAATTGAAGCGGTAAGGAAAGATGATGATGAAATGAAACCAACTGATCAAATGCTGCAAATCGATCTTAACACCATCAAGCTCGCAACTGATAACTTCTCTGATGCAAATAAGCTTGGCAAAGGAGGATTTGGGCCTGTGTATAAGGGTCGGCTTCCCGATGGACAAGAAGTTGCTGTGAAAATGTTGTCCAAGCATTCTAGTCAAGGAGATTTAGAATTTAAGACTGAAGTGATGTTATTAGCTAAACTTCACCATCGGAATTTAGTAAGATTACTTGGTTTCTGTTTAGAAAAAACAGAAAAACTACTCATCTATGAATTGCTTCCTAATAAAAGTCTTGATTTCTTCTTATTCGATCCAAACCAGCAAGCTTATTTGAATTGGATAGAACGATTCAAGATTATAAGAGGCATTGCCCGTGGCCTACTTTACCTTCATCAGGATTCGAGATTACGCATTATTCATCGTGACCTCAAAGCAAGTAATATTCTCCTAGATGAAGAGTTGAATCCTAAGATATCAGATTTTGGCACTGCACGATTATTTAAGGTGGATCAAACTCGAAGCAATACTAATAGAATTGTTGGAACCTTTGGCTACATGGCACCAGAATATGTGTTATATGGTCAATGTTCAGTAAAATCAGACGTCTATAGTTTTGGCATATTGGTTCTAGAGATTATAAGTGGCAAGAAAAACAACAGCACCTTTCATGCAGATAGTACAGAGAGTCTGGATCTGCTAAATTTTGGATGGAAAAATTGGAGGGAAGGGACAGCCTCAAGTATAGTAGATCCTGTGTTGAGAAATGGTACAAGAAATGAAATAATGAGATGCATCCACATTGCATTGCTGTGTGTTCAAGAAAATGCAGCTGATCGGCCAACCATGGCCTCAGTCTCATTCATGTTGAACAGCTTCTCTTCCTCTCTCCCTTTACCTTCAGAACGTCGATTCCTTGTGAATTATAGCAGTTCATCTCAGACCATGGCTTTGAGACATGAGAGTTCAGAAACGACAAGATCAAGTGATGAACATGGAAGTAACTCTAATCAACCATCACGAAATGATTTATCGATTACAGAACTATATCCTCGTTAG 2031 0.3954 MTTTTAIFLALISLLSHLLVLTAQPDFFFHKCFNESGNYTKPSAYHTNLNTLLSNFTSDTKIDYGFYNYSNGETPNRVNALGMCRGDVKPDSCRSCLNNAITLLPNLCPYQKEAFGYYDLCMFRYASRQMFGIYQDHDFQNYSGNQTDAVDANKYKDSAIKLLHSLKERAKVGEGSYHKVAAGNATADQSQAAYGLVQCTPDLNEQDCFDCLTDSIFYIPNCCQDKVGGRVIKLNCNIRFENFLFFDPAHINSVQLPLSPADLSPPTDSTSSQGGSKKSRTTVIAVVLIGTLVAVLILFFIIKRSKKTHGIEAVRKDDDEMKPTDQMLQIDLNTIKLATDNFSDANKLGKGGFGPVYKGRLPDGQEVAVKMLSKHSSQGDLEFKTEVMLLAKLHHRNLVRLLGFCLEKTEKLLIYELLPNKSLDFFLFDPNQQAYLNWIERFKIIRGIARGLLYLHQDSRLRIIHRDLKASNILLDEELNPKISDFGTARLFKVDQTRSNTNRIVGTFGYMAPEYVLYGQCSVKSDVYSFGILVLEIISGKKNNSTFHADSTESLDLLNFGWKNWREGTASSIVDPVLRNGTRNEIMRCIHIALLCVQENAADRPTMASVSFMLNSFSSSLPLPSERRFLVNYSSSSQTMALRHESSETTRSSDEHGSNSNQPSRNDLSITELYPR 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01440 676 SMART serkin_6 342 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01440 676 Gene3D - 25 130 IPR038408 -
Accr1g01440 676 Gene3D - 136 245 IPR038408 -
Accr1g01440 676 FunFam Cysteine-rich receptor-like protein kinase 10 303 417 - -
Accr1g01440 676 MobiDBLite consensus disorder prediction 640 676 - -
Accr1g01440 676 Pfam Salt stress response/antifungal 32 126 IPR002902 -
Accr1g01440 676 Pfam Salt stress response/antifungal 151 242 IPR002902 -
Accr1g01440 676 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 25 130 - -
Accr1g01440 676 ProSiteProfiles Protein kinase domain profile. 342 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01440 676 ProSiteProfiles Gnk2-homologous domain profile. 137 245 IPR002902 -
Accr1g01440 676 SUPERFAMILY Protein kinase-like (PK-like) 325 650 IPR011009 -
Accr1g01440 676 Gene3D Transferase(Phosphotransferase) domain 1 418 624 - -
Accr1g01440 676 FunFam cysteine-rich receptor-like protein kinase 10 418 621 - -
Accr1g01440 676 MobiDBLite consensus disorder prediction 653 669 - -
Accr1g01440 676 CDD STKc_IRAK 348 615 - -
Accr1g01440 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Accr1g01440 676 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Accr1g01440 676 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 28 675 - -
Accr1g01440 676 Gene3D Phosphorylase Kinase; domain 1 304 417 - -
Accr1g01440 676 Pfam Protein tyrosine and serine/threonine kinase 346 610 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01440 Accr-Chr1 42517067 42519924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01440 25 676 Receptor kinase-like Gene Family AT4G21410 45.387 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr1g01440 PK_Tyr_Ser-Thr 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01440 - - lang:109353867 716.457