Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01439 ATGGCTCCAGAGTATGTACTACATGGGCAATGCTCGATGAAATTGGATGTGTATAGTTTCGGTGTGCTAATTCTAGAGATTATAAGTGGGAAGAAAAACAATAGCATCTTCAATGAAAATAGCTACGGTCTACTAGACTTTGCATGGCAAAACTGGAGGCAAGGGAATGGCTCAAATATAATAGATCCTTTGTTAATCAATAGTGATTCAAGAAATGAAATAATGAGATGCATTCACGTCGGATTGCTATGTGTTCAGGAAAATGCGATTGACAGGCCAACTATGGCTTCAGTTGGAGTAATGCTGAGCAGCCACTCTTTGTCTCTCCCAGTCCCATCGAAACCTGCATTTTTAATGAATAGCACCAGTTCAATTTTGAAGGATTCTAGTTCAGAGGCTACAAGATCAAGTGAAGGAAGAAGAAACTATGTTCAAGCGTCAAGTAATGAGGTCTCTATTACAAACCTATCTCCTCGCTAA 480 0.3958 MAPEYVLHGQCSMKLDVYSFGVLILEIISGKKNNSIFNENSYGLLDFAWQNWRQGNGSNIIDPLLINSDSRNEIMRCIHVGLLCVQENAIDRPTMASVGVMLSSHSLSLPVPSKPAFLMNSTSSILKDSSSEATRSSEGRRNYVQASSNEVSITNLSPR 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01439 159 Gene3D Transferase(Phosphotransferase) domain 1 1 109 - -
Accr1g01439 159 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 159 - -
Accr1g01439 159 SUPERFAMILY Protein kinase-like (PK-like) 1 131 IPR011009 -
Accr1g01439 159 MobiDBLite consensus disorder prediction 128 159 - -
Accr1g01439 159 ProSiteProfiles Protein kinase domain profile. 1 108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01439 159 Pfam Protein tyrosine and serine/threonine kinase 1 42 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01439 Accr-Chr1 42498759 42499326 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01439 1 159 Receptor kinase-like Gene Family AT4G21410 50.000 1.60e-46 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr1g01439 PK_Tyr_Ser-Thr 5.2e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01439 - - qsu:112015079 193.356