Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01438 ATGACAAGGATTACTGTCACTATTTTTCTGGCCCTGCTTTCATTCCTGTCCCATCTTCTCATTCTCAGCACCCAGCAGGAGCAGCAGCACCCTGACACCGTTCATCCCAATTGTTCCATTGGCAATGGAACCTACACAGACACAAGCCCCTATCACAATAACCTCATAACCCTTCTTTCCAATTTCACCTCCAACACAACAGATGACTATGGCTTCTACAATTACTCGTACGGCCAAAACCCCGACACAGTTTACGCATCAGGTCTCTGCAGAGGAGATGTTACACCTGATGTTTGCCGTAGTTGCCTCAACAATGCCACAAGGCTTCTCCCACATAATTGTTCAAACCAGAAGGAGGCATTTCTATACTATGACTTGTGCATCCTTCAATACTCAAGTAGCTCAATGTTTGGGATATACGTGGACCCTGATTTTTCCTATGCGTTTAATAACCCAGAAAAAGCAGCAGATGCAGACCAGTACACAGATGCGCTTGATCGGCTAATGAAAGTTCTTAAAACCAACGCCGCTGATGGTGGCTCTGATCGGAAGGTGGCTGCCGGAAACTCCTCGACCCTATCATCTGGTCAAACTGTACATGGTCTGGCTCAGTGCACGCCGGATTTAACCGAGCAACAATGCGACGACTGCTTGGTGAATGCTATCTCGGGTATCCCACTATGTTGTCAGAACAAGGTTGGCGGTAGGGTTATCAAACGGAACTGCAATCTTAGATTTGAGAAGGTCCAATTCTATAATCCTACAGTTATTGATCCAATACAAGTTCTTCCTCCTTCGCAAGGAAATAATTTTAAATCAAGAAACATCATTGTGATAATTATACCGATTATCGCAGTCGCAGTCTTCTTATTGCTCATCTCCATCTTCATTTTCTTGAAAATGAAGAAACCTAAAGAAGCAATTCAAAATTCCTTCGTAGAAGCTGATCAACTCGATGGTGAAATTAAACATGCTGAGATAATACAATTTGACTTTGACACCATCAAACTCACAACAGATAATTTCTCTGATTCAAATAAACTTGGACAAGGTGGATTTGGAGCAGTTTACAAGGGTGAGCTTTATAATGGAGAAGAAGTTGCAGTTAAAAGGTTATCCAGGGATTCTGGGCAGGGAGATAGAGAATTTAAGAATGAAGTAATGTTGGTAGCTAAGCTTCAGCATCGCAATTTAGTTCGACTCCTTGGCTTCTGTTTGGAAAGAGGAGAAAGACTAGTCGTGTATGAATATCTTCCCAATAAAAGTCTTGACTTCTTATTATTTGATCCGGATCGTAGTGCTCATTTGAATTGGGCAACGCGTCATCAAATTATTGTTGGAGTAGCTCGTGGCCTTCTTTATTTTCATGAGGATTCTCGACTTCGAGTCATTCATCGTGATCTCAAAGCAAGTAATATTCTTCTAGATGGAGAGTTAAATCCCAAGATATCAGATTTTGGAATGGCAAGGTTATTTAGTGCAGATCAAACTCAAAGTAACACAAATAGAATTGTTGGAACCTATGGATACATGGCTCCAGAGTATGTACTACATGGGCAATGCTCGATGAAATTGGATGTGTATAGTTTCGGTGTGCTAATTCTAGAGATTATAAGTGGGAAGAAAAACAATAGCATCTTCAATGAAAATAGCTACGGTCTACTAGACTTTGCATGGCAAAACTGGAGGCAAGGGAATGGCTCAAATATAATAGATCCTTTGTTAATCAATAGTGATTCAAGAAATGAAATAATGAGATGCATTCACGTCGGATTGCTATGTGTTCAGGAAAATGCGATTGACAGGCCAACTATGGCTTCAGTTGGAGTAATGCTGAGCAGCCACTCTTTGTCTCTCCCAGTCCCATCGAAACCTGCATTTTTAATGAATAGCACCAGTTCAATTTTGAAGGATTCTAGTTCAGAGGCTACAAGATCAAGTGAAGGAAGAAGAAACTATGTTCAAGCGTCAAGTAATGAGGTCTCTATTACAAACCTATCTCCTCGCTAA 2010 0.4109 MTRITVTIFLALLSFLSHLLILSTQQEQQHPDTVHPNCSIGNGTYTDTSPYHNNLITLLSNFTSNTTDDYGFYNYSYGQNPDTVYASGLCRGDVTPDVCRSCLNNATRLLPHNCSNQKEAFLYYDLCILQYSSSSMFGIYVDPDFSYAFNNPEKAADADQYTDALDRLMKVLKTNAADGGSDRKVAAGNSSTLSSGQTVHGLAQCTPDLTEQQCDDCLVNAISGIPLCCQNKVGGRVIKRNCNLRFEKVQFYNPTVIDPIQVLPPSQGNNFKSRNIIVIIIPIIAVAVFLLLISIFIFLKMKKPKEAIQNSFVEADQLDGEIKHAEIIQFDFDTIKLTTDNFSDSNKLGQGGFGAVYKGELYNGEEVAVKRLSRDSGQGDREFKNEVMLVAKLQHRNLVRLLGFCLERGERLVVYEYLPNKSLDFLLFDPDRSAHLNWATRHQIIVGVARGLLYFHEDSRLRVIHRDLKASNILLDGELNPKISDFGMARLFSADQTQSNTNRIVGTYGYMAPEYVLHGQCSMKLDVYSFGVLILEIISGKKNNSIFNENSYGLLDFAWQNWRQGNGSNIIDPLLINSDSRNEIMRCIHVGLLCVQENAIDRPTMASVGVMLSSHSLSLPVPSKPAFLMNSTSSILKDSSSEATRSSEGRRNYVQASSNEVSITNLSPR 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01438 669 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 669 - -
Accr1g01438 669 FunFam Cysteine-rich receptor-like protein kinase 10 302 417 - -
Accr1g01438 669 Gene3D Phosphorylase Kinase; domain 1 305 417 - -
Accr1g01438 669 FunFam Cysteine-rich receptor-like protein kinase 10 145 251 - -
Accr1g01438 669 ProSiteProfiles Gnk2-homologous domain profile. 33 136 IPR002902 -
Accr1g01438 669 ProSiteProfiles Protein kinase domain profile. 342 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01438 669 FunFam cysteine-rich receptor-like protein kinase 10 418 619 - -
Accr1g01438 669 Gene3D - 143 251 IPR038408 -
Accr1g01438 669 Gene3D - 32 135 IPR038408 -
Accr1g01438 669 SMART serkin_6 342 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01438 669 ProSiteProfiles Gnk2-homologous domain profile. 143 251 IPR002902 -
Accr1g01438 669 Pfam Salt stress response/antifungal 38 133 IPR002902 -
Accr1g01438 669 Pfam Salt stress response/antifungal 154 248 IPR002902 -
Accr1g01438 669 Gene3D Transferase(Phosphotransferase) domain 1 418 619 - -
Accr1g01438 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Accr1g01438 669 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 31 136 - -
Accr1g01438 669 SUPERFAMILY Protein kinase-like (PK-like) 328 640 IPR011009 -
Accr1g01438 669 MobiDBLite consensus disorder prediction 638 669 - -
Accr1g01438 669 CDD STKc_IRAK 348 612 - -
Accr1g01438 669 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524
Accr1g01438 669 Pfam Protein kinase domain 343 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01438 Accr-Chr1 42495854 42499326 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01438 1 669 Receptor kinase-like Gene Family AT4G21410 44.748 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr1g01438 Pkinase 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01438 - - qsu:111986875 696.812