Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01434 ATGTTGCTGTCACTCGTTTTATGGCACTGCTATCGCTTATGGAGAGAGAAGAATGATCTACTCAAACTAAACTTTGGAGAAGAAAGTTCCAGCTTTAAGTCTATGCGATATAGTTTGTCTGCTCTTGAAGCTGCAACGAATAAGTTTTTTCAGGCTAATAAGATAGGAAAAGGAGGATTTGGAGAAGTTTACAAGGGTATTCTTCCTAATGGACAAGTAGTTGCAGTTAAGAGACTCTCTAAGAACTCTCAACAAGGTTCACTAGAATTCAAAACTGAAGTTTTACTAATATCCAAACTTCAGCACAGAAATTTAGTGGCTTTGGTTGGATTTTGCTTGGAGAATCAAGAGAAGATGCTTATTTATGAATATCTGCCCAACAAGAGCATTGATTACTTTTTATTTGGTTCACAAGAGCAAAAAATATCAAATTGGCTTGAACGGTATAAAATCATTAGAGGAATTGCTCAAGGACTCTTATATTTACATGAACATTCAAGATTCAAAATTATCCATCGTGACTTGAAACCCAGTAATATTTTATTTGATAACAATATGAATCCCAAGATATCAGACTTTGGCCTAGCAAAGATGTATGCTATGGATCAAAATCAGGAAAGTACAAGCAAGATCGTAGGAACACATGGTTATATGGCTCCTGAATCTTTAATGTACGGAGAATTTTCAGAAAAATCAGATATTTTTAGTTTTGGTGTAATAATTTTAGAGATAATTAGTGGCAAGAGGAATGGCAGCTCCGATGAACCACACCTCTTAATTAGTCATGTTTGGAAACAATGGCAGGATGGGACAGCACTTGAAATATTGGACCCATGCCTTGTAAGAAAATCTTACTCAGAAAATGAAGTCCTAAAATGTATACAGATTGGGTTATTATGTGTCCAAGCAAATCCAAATGATAGGCCACCAATGGAAAATATTATTTTATATCTGAGTAATTGTAATGCTGCCACTGAATTGAAATATCCAAGAGAACCTGCGTTCTTCACACGTGGTCGTAGAAGGGATGAACCAAACTTGGAAGTTGATTCACGTTGGGCTCAATCATCTGTGAATGAAATGTCTGAGAGTAAGTTGTTGCCTCGCTAG 1110 0.3613 MLLSLVLWHCYRLWREKNDLLKLNFGEESSSFKSMRYSLSALEAATNKFFQANKIGKGGFGEVYKGILPNGQVVAVKRLSKNSQQGSLEFKTEVLLISKLQHRNLVALVGFCLENQEKMLIYEYLPNKSIDYFLFGSQEQKISNWLERYKIIRGIAQGLLYLHEHSRFKIIHRDLKPSNILFDNNMNPKISDFGLAKMYAMDQNQESTSKIVGTHGYMAPESLMYGEFSEKSDIFSFGVIILEIISGKRNGSSDEPHLLISHVWKQWQDGTALEILDPCLVRKSYSENEVLKCIQIGLLCVQANPNDRPPMENIILYLSNCNAATELKYPREPAFFTRGRRRDEPNLEVDSRWAQSSVNEMSESKLLPR 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01434 369 ProSiteProfiles Protein kinase domain profile. 49 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01434 369 Pfam Protein kinase domain 52 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01434 369 MobiDBLite consensus disorder prediction 347 369 - -
Accr1g01434 369 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 364 - -
Accr1g01434 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Accr1g01434 369 SUPERFAMILY Protein kinase-like (PK-like) 31 335 IPR011009 -
Accr1g01434 369 Gene3D Phosphorylase Kinase; domain 1 15 124 - -
Accr1g01434 369 ProSitePatterns Protein kinases ATP-binding region signature. 55 77 IPR017441 GO:0005524
Accr1g01434 369 SMART serkin_6 49 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01434 369 FunFam cysteine-rich receptor-like protein kinase 10 125 325 - -
Accr1g01434 369 FunFam Cysteine-rich receptor-like protein kinase 10 14 124 - -
Accr1g01434 369 Gene3D Transferase(Phosphotransferase) domain 1 125 332 - -
Accr1g01434 369 CDD STKc_IRAK 55 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01434 Accr-Chr1 42344770 42346966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01434 27 369 Receptor kinase-like Gene Family AT4G11530 51.143 2.55e-124 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr1g01434 Pkinase 1.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01434 - - pcin:129293778 433.335