Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01430 ATGCCACCGCCACCCCAAGCATCAGGAGGAAGTGATAGCACTGGATCACAAACTGTTGTCAAGATCATTGTCCCCATTATCATTTCAGTGATACTTATTTGTTTGGTGAGCTGCTATTTACTAAGGAGAAGAACAACGAAGAGAAGACAGTCTATTCTCACAGAAAATTTTGGAAAAGAAGGTTCAAATCTGAGGTCCTTGCAATTTAGCTTGGCTACAATTGAAGCTGCAACAAATAAGTTTTCTGAAGAGAACCAGATAGGGAAAGGAGGATTTGGAGCAGTTTATAAGGGCACTCTTCCTGATGGACAAGAAATTGCTGTCAAGAGACTCTCAAGAAGTTCAGTGCAAGGAACTTTAGAATTCAAGAATGAAATATTGCTCATAGCCAAACTCCAACATAGAAATTTAGTGACATTATTGGGATTTTGTTTGGAAGAACAAGAGAAAATTCTTATTTATGAATACGTGCCTAACAAGAGCATAGATTTCTTCTTATTTGATTCTGAAAAACAAAGATTATTCAGTTGGCCTGAGCGATTCAAAATTATTGGAGGAATTGCACAGGGGCTTTCTTACCTACATGAACATTCTCGCCTTAAAGTTATCCATCGCGATCTCAAACCAAGTAATGTTTTATTAGACAACAAGATGAATCCAAAAATAGCAGATTTTGGTATGGCAAGAATGGTTGCTATAGATGAAGAGCAAGGAAGTACAAATAGAATTGTTGGGACCTATGGTTATATGGCTCCTGAATATATAATGAATGGACAATTTTCTGAGAAATCCGATGTATTTAGTTTTGGAGTTATAGTTTTAGAAGTGCTTAGTGGGAAGAGGAATGCTGGATCCTATGAATCATACCTATTAACAAATGTGTGGAAGCAGTGGAATGAGGGAACACCATTGCAAATATTGGATCCTTTTCTGATGGAATCATGTTCTAAAACTGAAGCAAGAAAATGTGTGCAAATTGGGTTATTGTGCGTTCAACAAAATCCAGAAGAGAGGCCAACAATGTCTCAGATTGTATCATATCTCAGTAATCTTTCCATTGAATTGCCATCTCCAAGAGAACCCGCATTCTTCATGCATTCCAATCCAACTACATTGGTAGCCGATTTGAGTTTGGACCAAACTCATCAGAGTTCAACTTCCAAGTCAGCCGGTTCAAATGAAAAGTCTTGGCTCTTGCCAAGATGA 1206 0.3789 MPPPPQASGGSDSTGSQTVVKIIVPIIISVILICLVSCYLLRRRTTKRRQSILTENFGKEGSNLRSLQFSLATIEAATNKFSEENQIGKGGFGAVYKGTLPDGQEIAVKRLSRSSVQGTLEFKNEILLIAKLQHRNLVTLLGFCLEEQEKILIYEYVPNKSIDFFLFDSEKQRLFSWPERFKIIGGIAQGLSYLHEHSRLKVIHRDLKPSNVLLDNKMNPKIADFGMARMVAIDEEQGSTNRIVGTYGYMAPEYIMNGQFSEKSDVFSFGVIVLEVLSGKRNAGSYESYLLTNVWKQWNEGTPLQILDPFLMESCSKTEARKCVQIGLLCVQQNPEERPTMSQIVSYLSNLSIELPSPREPAFFMHSNPTTLVADLSLDQTHQSSTSKSAGSNEKSWLLPR 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01430 401 ProSitePatterns Protein kinases ATP-binding region signature. 87 109 IPR017441 GO:0005524
Accr1g01430 401 Gene3D Phosphorylase Kinase; domain 1 42 156 - -
Accr1g01430 401 MobiDBLite consensus disorder prediction 380 401 - -
Accr1g01430 401 SMART serkin_6 81 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01430 401 Pfam Protein kinase domain 82 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01430 401 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 42 156 - -
Accr1g01430 401 Gene3D Transferase(Phosphotransferase) domain 1 157 357 - -
Accr1g01430 401 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 11 389 - -
Accr1g01430 401 MobiDBLite consensus disorder prediction 380 394 - -
Accr1g01430 401 CDD STKc_IRAK 87 351 - -
Accr1g01430 401 FunFam cysteine-rich receptor-like protein kinase 10 157 355 - -
Accr1g01430 401 ProSiteProfiles Protein kinase domain profile. 81 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01430 401 SUPERFAMILY Protein kinase-like (PK-like) 65 387 IPR011009 -
Accr1g01430 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01430 Accr-Chr1 42060776 42063139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01430 11 375 Receptor kinase-like Gene Family AT4G23190 52.139 1.27e-138 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr1g01430 Pkinase 4.7e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01430 - - pcin:129293778 571.622