Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01429 ATGGTTCAACTCTATCGTTATTCCTTCATACCATTAAGGCCTATCGTTTCTTTGGCCTTTTTTCTTTCATTCCTTTCTCACCTTCTCATTCTCACGGCCCAACCTGATTTCCGAGCGAACGAATGTTACCCAGAAAGAGGAAACTATACAAACACAAGTGCCTATGACACCAACCTCAAGACCCTTCTTTCTGATTTCACTTCCGACGACACAAATATTGAATATGGCTTCATCAATTCCTCTTATGGACAAAACCCTGAGACAGTTCACGCACTTGGATTCTGCAGTGGCGATATGAAGCCTGAGTCTTGCCGTACTTGCCTCCTCAATGTCTCCATCCTTCTCCCACGACTTTGTCCAAATCAGAAAGAGGCAGTTGGATACTATGACAATTGCACGTTTCGATACTCGTATCGTTCAATCTTTGGAATATACAACGTCTCCGATGTATCATTCTTTTTATGGAACCCAGCTAATTCAACCACACTCACAGATCAATATGTACCGGTACTATTGGATAAGGTAAAGAAGCAAGCACCAACAGGAGGCTCTCATCGTATGTTTGCAGCAGCCAATGATACTACAAGCCAATCTGGGAATGTGTATGCTTTTGCTCAGTGCAGTCCGGATCTGTCTGAGCATGATTGCAGGTCCTGCTTAGAGGATGTTTCGAAAGGAATTCAACTATGCTGTAACGGAAAGAATGGTGGTAGGGTTATCAATCCCAGCTGTTATATTAGATATGAGAGCTTCCTCTTCTATGATTACACCGCCGTTTCAGCCCAGCCATCTCCTCCGCCAGCCACCACCATAATGCCACCGCCACCCCAAGCATCAGGAGGAAGTGATAGCACTGGATCACAAACTGTTGTCAAGATCATTGTCCCCATTATCATTTCAGTGATACTTATTTGTTTGGTGAGCTGCTATTTACTAAGGAGAAGAACAACGAAGAGAAGACAGTCTATTCTCACAGAAAATTTTGGAAAAGAAGGTTCAAATCTGAGGTCCTTGCAATTTAGCTTGGCTACAATTGAAGCTGCAACAAATAAGTTTTCTGAAGAGAACCAGATAGGGAAAGGAGGATTTGGAGCAGTTTATAAGGGCACTCTTCCTGATGGACAAGAAATTGCTGTCAAGAGACTCTCAAGAAGTTCAGTGCAAGGAACTTTAGAATTCAAGAATGAAATATTGCTCATAGCCAAACTCCAACATAGAAATTTAGTGACATTATTGGGATTTTGTTTGGAAGAACAAGAGAAAATTCTTATTTATGAATACGTGCCTAACAAGAGCATAGATTTCTTCTTATTTGATTCTGAAAAACAAAGATTATTCAGTTGGCCTGAGCGATTCAAAATTATTGGAGGAATTGCACAGGGGCTTTCTTACCTACATGAACATTCTCGCCTTAAAGTTATCCATCGCGATCTCAAACCAAGTAATGTTTTATTAGACAACAAGATGAATCCAAAAATAGCAGATTTTGGTATGGCAAGAATGGTTGCTATAGATGAAGAGCAAGGAAGTACAAATAGAATTGTTGGGACCTATGGTTATATGGCTCCTGAATATATAATGAATGGACAATTTTCTGAGAAATCCGATGTATTTAGTTTTGGAGTTATAGTTTTAGAAGTGCTTAGTGGGAAGAGGAATGCTGGATCCTATGAATCATACCTATTAACAAATGTGTGGAAGCAGTGGAATGAGGGAACACCATTGCAAATATTGGATCCTTTTCTGATGGAATCATGTTCTAAAACTGAAGCAAGAAAATGTGTGCAAATTGGGTTATTGTGCGTTCAACAAAATCCAGAAGAGAGGCCAACAATGTCTCAGATTGTATCATATCTCAGTAATCTTTCCATTGAATTGCCATCTCCAAGAGAACCCGCATTCTTCATGCATTCCAATCCAACTACATTGGTAGCCGATTTGAGTTTGGACCAAACTCATCAGAGTTCAACTTCCAAGTCAGCCGGTTCAAATGAAAAGTCTTGGCTCTTGCCAAGATGA 2019 0.4037 MVQLYRYSFIPLRPIVSLAFFLSFLSHLLILTAQPDFRANECYPERGNYTNTSAYDTNLKTLLSDFTSDDTNIEYGFINSSYGQNPETVHALGFCSGDMKPESCRTCLLNVSILLPRLCPNQKEAVGYYDNCTFRYSYRSIFGIYNVSDVSFFLWNPANSTTLTDQYVPVLLDKVKKQAPTGGSHRMFAAANDTTSQSGNVYAFAQCSPDLSEHDCRSCLEDVSKGIQLCCNGKNGGRVINPSCYIRYESFLFYDYTAVSAQPSPPPATTIMPPPPQASGGSDSTGSQTVVKIIVPIIISVILICLVSCYLLRRRTTKRRQSILTENFGKEGSNLRSLQFSLATIEAATNKFSEENQIGKGGFGAVYKGTLPDGQEIAVKRLSRSSVQGTLEFKNEILLIAKLQHRNLVTLLGFCLEEQEKILIYEYVPNKSIDFFLFDSEKQRLFSWPERFKIIGGIAQGLSYLHEHSRLKVIHRDLKPSNVLLDNKMNPKIADFGMARMVAIDEEQGSTNRIVGTYGYMAPEYIMNGQFSEKSDVFSFGVIVLEVLSGKRNAGSYESYLLTNVWKQWNEGTPLQILDPFLMESCSKTEARKCVQIGLLCVQQNPEERPTMSQIVSYLSNLSIELPSPREPAFFMHSNPTTLVADLSLDQTHQSSTSKSAGSNEKSWLLPR 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01429 672 MobiDBLite consensus disorder prediction 651 665 - -
Accr1g01429 672 SMART serkin_6 352 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01429 672 FunFam cysteine-rich receptor-like protein kinase 10 428 626 - -
Accr1g01429 672 Gene3D - 154 253 IPR038408 -
Accr1g01429 672 Gene3D - 36 140 IPR038408 -
Accr1g01429 672 Pfam Salt stress response/antifungal 42 137 IPR002902 -
Accr1g01429 672 Pfam Salt stress response/antifungal 170 249 IPR002902 -
Accr1g01429 672 Gene3D Transferase(Phosphotransferase) domain 1 428 628 - -
Accr1g01429 672 CDD STKc_IRAK 358 622 - -
Accr1g01429 672 ProSiteProfiles Gnk2-homologous domain profile. 146 253 IPR002902 -
Accr1g01429 672 MobiDBLite consensus disorder prediction 264 284 - -
Accr1g01429 672 SUPERFAMILY Protein kinase-like (PK-like) 337 658 IPR011009 -
Accr1g01429 672 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Accr1g01429 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Accr1g01429 672 Pfam Protein kinase domain 353 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01429 672 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 37 660 - -
Accr1g01429 672 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 313 427 - -
Accr1g01429 672 ProSiteProfiles Gnk2-homologous domain profile. 37 141 IPR002902 -
Accr1g01429 672 ProSiteProfiles Protein kinase domain profile. 352 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01429 672 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 35 141 - -
Accr1g01429 672 MobiDBLite consensus disorder prediction 651 672 - -
Accr1g01429 672 Gene3D Phosphorylase Kinase; domain 1 313 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01429 Accr-Chr1 42059963 42063139 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01429 17 660 Receptor kinase-like Gene Family AT4G05200 43.030 6.08e-177 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr1g01429 Pkinase 1.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01429 - - pcin:129293778 786.563