Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01408 ATGGGTTGCTTTCACTGTTGCATTAACCCGTCGGAGAAAGGCGCCGATGAACCAACAGAAGTTTCGAAACGCAGGGCAGAATTGAAATCCTATACGTTGAAATCGATTGTTTCAACTATTTCATTCAGGACAGGTAGCAGCAGGCACAGAAGGATAACCGAAGAGATACAAAAACATGGAGTTGTACAAAATGAAGTAAAAGTTTTCACATACAAAGAACTCGGTGATGCAACTGACGGTTTCAGCAATGAAGACAAAATAGGCGAGGGGGGATTCGGAGTGGTCTACAAAGGACGCATAGAAAGCATTGATCAAGTTGTGGCTGTGAAGCAACTGGACAGACAAGGAAGGCAAGGAACTAGAGAATTTATCTCAGAGGTTTTGATGTTAAGCTTGTTGAAGCATCCAAACCTTGTCAATTTGATTGGTTATTGTGTTGAAGACGACCACAGGATTTTGACCTACGACTTCATGCCCAATGGGAGTCTAGAAGATCGCCTTCTAGACTTGGCTCCAAATAAGGCGCCTTTATCGTGGGATATGAGGATGAAAATAGCTGAGGGAGCTGCAAGAGGGCTTGAGTATCTACATGAAATTGCTGAGCCACAAGTAATATACCGTGATTTTAAAGCGTCAAATATACTGTTAGATGAGGATTTCAATCCCAAGCTTTCTGATTTTGGAATGGCTAAGATGTGTCCAACACAAGGCCAGCTCTACATCACCACAAGGGTCATGGGAACCTATGGCTATTGTGCACCAGAGTATGCGGCTACTGGACAACTAACTACCAAGTCTGATGTTTATAGCTTTGGGGTTGTGCTTTTGGAGATAATCTCTGGCAGAAGAGTTATTGACGATGCACGAGCAGCAGACGAGCAGAACCTGATCCAATGGGCACAACCTCTGTTCAAGGATAGAAGCAAGTTTACTCTAATGGCTGACCCCTTGCTTGATGGTAACTACCCTGAGAAAGGTCTATTTCAAGCACTTGCAGTGGCAGCAATGTGTTTGCAAGAAGATGCTGAGGCAAGACCTTCAATGGGTGAAGTTGTGGAAGTTCTTGAGCTTGTAACAAAACCAAAAGATAGAGAATCATAG 1101 0.436 MGCFHCCINPSEKGADEPTEVSKRRAELKSYTLKSIVSTISFRTGSSRHRRITEEIQKHGVVQNEVKVFTYKELGDATDGFSNEDKIGEGGFGVVYKGRIESIDQVVAVKQLDRQGRQGTREFISEVLMLSLLKHPNLVNLIGYCVEDDHRILTYDFMPNGSLEDRLLDLAPNKAPLSWDMRMKIAEGAARGLEYLHEIAEPQVIYRDFKASNILLDEDFNPKLSDFGMAKMCPTQGQLYITTRVMGTYGYCAPEYAATGQLTTKSDVYSFGVVLLEIISGRRVIDDARAADEQNLIQWAQPLFKDRSKFTLMADPLLDGNYPEKGLFQALAVAAMCLQEDAEARPSMGEVVEVLELVTKPKDRES 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01408 366 SUPERFAMILY Protein kinase-like (PK-like) 62 358 IPR011009 -
Accr1g01408 366 ProSiteProfiles Protein kinase domain profile. 81 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01408 366 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 54 157 - -
Accr1g01408 366 Gene3D Transferase(Phosphotransferase) domain 1 158 366 - -
Accr1g01408 366 CDD STKc_IRAK 87 356 - -
Accr1g01408 366 PIRSF ILK 26 365 - -
Accr1g01408 366 FunFam Serine/threonine-protein kinase PBS1 158 366 - -
Accr1g01408 366 Pfam Protein kinase domain 82 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01408 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Accr1g01408 366 PANTHER OS07G0668900 PROTEIN 23 363 - -
Accr1g01408 366 ProSitePatterns Protein kinases ATP-binding region signature. 87 110 IPR017441 GO:0005524
Accr1g01408 366 Gene3D Phosphorylase Kinase; domain 1 41 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01408 Accr-Chr1 41666598 41668714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01408 1 363 Glycoside Hydrolase AT3G07070 54.521 9.91e-137 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Accr1g01408 Pkinase 3.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01408 - - qsa:O6P43_031228 478.404