LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr1g01344	ATGCTTCCTGGTTTGGGATTCCCAGTGAATCTTGGCCGTGTAATGGAATCTTCTGATAGTAATCGGAAGGTCCTCAGTGAGATTGATTTCTTCTCTAACCCAACAAGCAAGCCGTCAGCTCAAGAAATTCATCATCATCATCAAGATGTTAAAACCCTTTCCAGTAATATCTCTGTCAAGAAGGAAATTCCTCAGACTCAACCAGTTTCTAGGTGTAACTTGGATATGAATAATGGTTTACAACTGCATACTGGTAATACCAGGAGTGATCAATCTACGTTGGATGATCATGGCGTCTCGTCAGACGCTGACGATAAGCGAGCCAAAAGCAACGAGTTGAAACAACTGCAAGAAGAGGTTCAGAGAATGAACACAGAAAATCAGAACCTGAAAGAGATGCTGAGCCACATGAGCAATAACTACACCGCCCTGCAACTGCATCTTGCTGGATTAATCCAACAGCGACAACAACACAACCAACATGATCATCATGATCTTCAGGTTGTTGGAAAAAGTGAGGAGAAAAAACAGGTGACGGCGAGGCAGTTTATTGAGCTTGGATCAGGTGATGATGAAGTGTCCAATTCTAGTTCAGATGAAAGAACTCAATCTGCTTCACCTAATAATGGTAAAAGTGAGAGTCCAGAATCAGAATCACAAAAGGCTTATAAGCTTCAGAAACTGAATCCTTCTTCTTCGAATTCCATAATAGATCAATCCACTACTACTGCAACAACAGAAGCCACCATGAGAAAAGCTCGTGTCTCAGTCCGTGCTAGATCAGAAGCCCCCATGATCAGTGATGGCTGTCAATGGAGAAAATATGGACAAAAAATGGCTAAAGGAAACCCATGTCCTCGCGCTTATTACAGATGCACCATGGCTGTTGGTTGTCCTGTTCGTAAACAAGTTCAGCGTTGTGCAGAAGACAAAACCATATTGGTAACAACGTACGAAGGAAATCATAACCATCCATTGCCTCCGGCGGCCATGGCGATGGCTTCAACGACAAGTGCAGCAGCGGGAATGTTACTGTCTGGTTCAATGTCAAGTCCGGAAGGGTTGATGAAGATGAACCCTATGTTAGCAAGAGCCATTCTTAACCCATCTTGTTCTTCCACCATGGCTACACTCTCTGCTTCAGCTCCTTTCCCTACTGTCACATTGGACCTAACTCACAACGTCAACAACGACAATAATATCAACAACGCAATGCTGCATCAGTTTCAAGTTCACCGCCCTAATACTACGCCGTTTCATCAGCTTGCTCAACCATTGTATAACCAGTCCAAGTTTTCTGGCCTTCAGTTGTCACAGGATAGGCCAGTTCATCAGCAGTCTTCTACTCCAGCTGACAACGTCGGTGACGCCGCCAAAGCCATCACCACGGACCCAAACTTCACGGCGGTTCTTGCAGCTGCTATCTCTTCCATCATCCGTGGTAATAATAATCAGAACAACAACAGTGCTAGCAGCAGCAATCCACATATCCTCAACAGTACTTCAATCAGCAGCTTTTCTGGGAATTAA	1530	0.4438	MLPGLGFPVNLGRVMESSDSNRKVLSEIDFFSNPTSKPSAQEIHHHHQDVKTLSSNISVKKEIPQTQPVSRCNLDMNNGLQLHTGNTRSDQSTLDDHGVSSDADDKRAKSNELKQLQEEVQRMNTENQNLKEMLSHMSNNYTALQLHLAGLIQQRQQHNQHDHHDLQVVGKSEEKKQVTARQFIELGSGDDEVSNSSSDERTQSASPNNGKSESPESESQKAYKLQKLNPSSSNSIIDQSTTTATTEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILVTTYEGNHNHPLPPAAMAMASTTSAAAGMLLSGSMSSPEGLMKMNPMLARAILNPSCSSTMATLSASAPFPTVTLDLTHNVNNDNNINNAMLHQFQVHRPNTTPFHQLAQPLYNQSKFSGLQLSQDRPVHQQSSTPADNVGDAAKAITTDPNFTAVLAAAISSIIRGNNNQNNNSASSSNPHILNSTSISSFSGN	509

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr1g01344	509	MobiDBLite	consensus disorder prediction	64	109	-	-
	Accr1g01344	509	SMART	WRKY_cls	266	326	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Accr1g01344	509	MobiDBLite	consensus disorder prediction	157	180	-	-
	Accr1g01344	509	ProSiteProfiles	WRKY domain profile.	261	327	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Accr1g01344	509	PANTHER	WRKY TRANSCRIPTION FACTOR 36-RELATED	78	492	IPR044810	GO:0003700
	Accr1g01344	509	MobiDBLite	consensus disorder prediction	486	509	-	-
	Accr1g01344	509	MobiDBLite	consensus disorder prediction	64	94	-	-
	Accr1g01344	509	Gene3D	WRKY domain	251	328	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Accr1g01344	509	Coils	Coil	106	140	-	-
	Accr1g01344	509	FunFam	probable WRKY transcription factor 31	251	328	-	-
	Accr1g01344	509	MobiDBLite	consensus disorder prediction	154	260	-	-
	Accr1g01344	509	MobiDBLite	consensus disorder prediction	189	250	-	-
	Accr1g01344	509	MobiDBLite	consensus disorder prediction	95	109	-	-
	Accr1g01344	509	Pfam	WRKY DNA -binding domain	268	325	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Accr1g01344	509	SUPERFAMILY	WRKY DNA-binding domain	259	327	IPR036576	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr1g01344	Accr-Chr1	40327879	40330434	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr1g01344	7	486	WRKY Transcription Factor Family	AT1G62300	50.286	5.38e-140	413

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Accr1g01344		WRKY	4.2e-24	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr1g01344	-		-	gmx:100802124	486.878