Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01333 ATGGCGGCCACTCGTGTGGCTTCTTCTCTGTTTCTTCCGATCGCTTTGATCTTTGCTGCTCTTCATCTTTCTTTAGCCAACACTGACGCTACTGATGTTCAAGCGCTTCAAGTTTTGTACAACGCTTTAAACAGCCCATCTTGGCTAACTGGCTGGAAAATTGGTGGTGGTGATCCTTGTGGAGAGGCTTGGAAAGGGGTAACATGTGAGGGCTCAGCTGTTGTCTCCATAGAATTGTCAGGTTTGGGACTTAATGGAACTCTGGGATACCTGCTTTCAGACCTTATGTCACTGAGACAACTTGACTTAAGTGACAACAAGATCCACGACACGGTCCCTTACCAGTTGCCGCCCAATCTGACAAGCCTGAACCTTGCAAGAAATAACATGAGTGGAAATCTTCCTTATTCTATTTCTGCCATGACTTCCCTCAATTATCTGAATGTGAGCCACAATGCACTCTCCGTTTCAATTGGAGACATATTTGCTAACCTCGCTGATCTTAGTACCCTGGATCTATCGTTCAACGACTTTTCTGGAGATCTCCCTCCCTCATTTGGTTCATTGTCCAATCTTTCTTCTGTCTTTTTGCAGAACAATCAGTTGACTGGTTCACTTAGTGTTCTTGTTGGCTTGCCTTTAGATACTTTAAATGTCGCGAACAACAACTTCTCAGGATGGATACCTCATGAACTTAGTTCAATTCGTAATTTCATATCTGATGGGAACTCCTTTGACAATGGGCCTGCTCCTCCTCCTCCTCCACATACAGCCCCTCCTCCCAAAAGATCTAGCCATCACCGTTCTGGATCTGGCTCTAATAAAGCGCATGCTTCTGAATCTGACAAGGAAGGAGCTGATAGCCATAATGGCTTATCATCTGGGGCTATTATAGGCATTATTTTGGGTTCAATTTTTCTAGCTGTTGTTGTGCTACTTGCTCTTGCCTTATGTATCCGAAAGCGTAAAAGGAAGGAAAAAGGTGTCAGAACATCCAATGGGAATCCTCCTCTTGGAACCAATAATGTGACTCTTCCGATGCAAGAACAGAGGGTGAAAAGTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTAACAGATCTGAAGCCGCCTCCTGCGGAAAAAGTGATAGCTGAGAGGGTTCCTTCGAAAAATGGATCTGTTAAGCGGATAAAATCCCCTATAACTGCTACATCATACACAATTGCTACTCTCCAAAGTGCAACAAATAGCTTCAGTCAAGAATTTATTATCGGTGAAGGTTCTCTTGGTCGAGTTTACAGGGCTGAATTCCCTAATGGGAGGATCATGGCCATTAAAAAGATCGACAATGCAGCGCTGTCATTACAGGAGGAAGACAACTTTCTTGAAGCTGTATCATACATGTCACGCTTGCGGCATCCAAACATTGTTACACTAGCTGGATACTGTGCAGAGCATGGGCAGCGACTTCTAGTTTATGAGTATATTGGTAATGGAAATCTACATGATATGCTCCACTTTGCTGAAGATAGTAGCAAGGCTTTATCTTGGAATGCTCGTGTTCGAATAGCACTGGGCACCGCTCGAGCTTTAGAGTACTTGCATGAAGTATGTTTGCCTTCTGTTGTACATAGAAACTTTAAATCGGCAAACATATTACTTGATGAGGATTTGAATCCTCACTTGTCTGATTGTGGTTTAGCTGCTTTAACGCCAAACACAGAACGGCAGGTTTCAACTCAGATGGTTGGCTCATTTGGTTATAGTGCTCCTGAGTTTGCACTATCAGGAATATACACAGTAAAAAGTGATGTTTACAGTTTTGGAGTGGTGATGTTAGAGCTATTGACGGGTCGGAAGCCACTTGACTGTTCACGAGCAAGATCAGAGCAATCACTTGTGAGATGGGCTACTCCCCAACTTCATGATATAGATGCCTTGGCCAAAATGGTTGATCCTGCCTTGAATGGCATGTATCCTGCGAAGTCACTGTCACGCTTTGCCGATATCATTGCGCTCTGTGTTCAGCCGGAGCCTGAATTTCGACCTCCCATGTCTGAGGTTGTGCAAGCATTGGTTCGGCTAGTGCAAAGAGCGAGCGTGGTCAAACGCCGCCCCAGCGACGAATCTGGGTTTGCTCACAGGACCCCAGATCATGAAGCCTTTGACATGTCATTTTAA 2160 0.4481 MAATRVASSLFLPIALIFAALHLSLANTDATDVQALQVLYNALNSPSWLTGWKIGGGDPCGEAWKGVTCEGSAVVSIELSGLGLNGTLGYLLSDLMSLRQLDLSDNKIHDTVPYQLPPNLTSLNLARNNMSGNLPYSISAMTSLNYLNVSHNALSVSIGDIFANLADLSTLDLSFNDFSGDLPPSFGSLSNLSSVFLQNNQLTGSLSVLVGLPLDTLNVANNNFSGWIPHELSSIRNFISDGNSFDNGPAPPPPPHTAPPPKRSSHHRSGSGSNKAHASESDKEGADSHNGLSSGAIIGIILGSIFLAVVVLLALALCIRKRKRKEKGVRTSNGNPPLGTNNVTLPMQEQRVKSAAAAAAAAVVTDLKPPPAEKVIAERVPSKNGSVKRIKSPITATSYTIATLQSATNSFSQEFIIGEGSLGRVYRAEFPNGRIMAIKKIDNAALSLQEEDNFLEAVSYMSRLRHPNIVTLAGYCAEHGQRLLVYEYIGNGNLHDMLHFAEDSSKALSWNARVRIALGTARALEYLHEVCLPSVVHRNFKSANILLDEDLNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDCSRARSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRPSDESGFAHRTPDHEAFDMSF 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01333 719 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 377 488 - -
Accr1g01333 719 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 20 689 IPR046959 -
Accr1g01333 719 ProSiteProfiles Protein kinase domain profile. 411 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01333 719 Pfam Leucine Rich repeat 96 110 IPR001611 GO:0005515
Accr1g01333 719 Gene3D Ribonuclease Inhibitor 29 252 IPR032675 -
Accr1g01333 719 Gene3D Transferase(Phosphotransferase) domain 1 489 708 - -
Accr1g01333 719 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 489 699 - -
Accr1g01333 719 Pfam Protein kinase domain 414 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01333 719 ProSiteProfiles Leucine-rich repeat profile. 97 118 IPR001611 GO:0005515
Accr1g01333 719 Pfam Leucine rich repeat 118 178 IPR001611 GO:0005515
Accr1g01333 719 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Accr1g01333 719 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 29 256 - -
Accr1g01333 719 SUPERFAMILY Protein kinase-like (PK-like) 388 685 IPR011009 -
Accr1g01333 719 CDD STKc_IRAK 417 688 - -
Accr1g01333 719 Gene3D Phosphorylase Kinase; domain 1 373 488 - -
Accr1g01333 719 SUPERFAMILY L domain-like 29 237 - -
Accr1g01333 719 MobiDBLite consensus disorder prediction 243 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01333 Accr-Chr1 40133616 40138718 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01333 141 719 Strubbelig Receptor Gene Family AT4G22130 71.773 0.0 820
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Accr1g01333 Pkinase 7.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01333 - - aprc:113869285 1117.83