Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01322 ATGAAGCCCTCGAGACAGCAACGAGTTTGCAAGGCCTTGTGTTGCAGCTGTAATTGCAGGCTCAGTGTTTCTTCTTCCTCAGAATTAGAAGCTGCAGAAAGCAGTTCTTCTTCTTCATCAGCTTCTCATAGGTTTCCTTCTGTTTCAAGCTTAGCTCATGCCATGGTTCAGGAGAGGCTTGATCAAATGATAAGATCAGAGCAGAGAGAGAAGCTTCATCATCTTCATCGTCATCCTCGTCTTCATCATCAGAATCTGCAGAAACCATCAAGAGATGATCAAGAAGAAGGTGGTAGTGGTGGAACCAAGTTCGTGGTGATGGTGGCGATGGAGAAGAGTTCATATGATCCAAAAGAGGATTTCAGAGAGTCCATGGTGGAGATGATAATGTCGAATCGGCTTCAAGACGTCAAAGAACTACGAAGTCTGTTAAATTATTATGTTTCAATGAATTCACAAGAGTACCATAGTCTTATACTTGAGGTCTTTCATGAGGTTTGTACTCATCTCTTTTTATCATCATCATCGTCATCATATAAATGCCAATATTGGTAA 555 0.4126 MKPSRQQRVCKALCCSCNCRLSVSSSSELEAAESSSSSSSASHRFPSVSSLAHAMVQERLDQMIRSEQREKLHHLHRHPRLHHQNLQKPSRDDQEEGGSGGTKFVVMVAMEKSSYDPKEDFRESMVEMIMSNRLQDVKELRSLLNYYVSMNSQEYHSLILEVFHEVCTHLFLSSSSSSYKCQYW 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01322 184 MobiDBLite consensus disorder prediction 71 100 - -
Accr1g01322 184 Pfam Transcriptional repressor, ovate 114 171 IPR006458 -
Accr1g01322 184 ProSiteProfiles OVATE domain profile. 110 169 IPR006458 -
Accr1g01322 184 NCBIfam uncharacterized plant-specific domain TIGR01568 108 171 IPR006458 -
Accr1g01322 184 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 33 173 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01322 Accr-Chr1 39880259 39880813 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Accr1g01322 Ovate 5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01322 - - pcin:129293050 213.386