Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01309 ATGGAGTTTCTTGTGGCAATCGGAACGGGAATTGTGTCAAAACTTGGCGAGATGTTAGTGGATCCAGTCACATCACAAGTCAAACATATGATTCACTGTGACAAAAATATCAACCAAATGAAGAATGAACTCAACAATTTGGAAGACAGGAAGCTTGCAATTGAAGGAATGGTGGACGTAGACAGAAGAAATGGACGTTGCATTGCCCAAAATGTAGAATATTGGCTCGACCAAGTGGACAGCATTACAGAAAACGAATCACTTAAAGTGTACGATGATGAGTTAGTCAACATGAACAAGAAATGCCTCAATGGGTTGTGTCCAAATTTGGTGTTTCGTTATTCACTAAGCAAGAAAGCAAGAAAAATAACGCAAGATCTTGTTTCCCTGAAGGAGCAAAAATTTGAGTTGATATCTTACCCTGCACCTCTACCAACACTAGGATCCACCTTCAAAGAAGGCATTAAGAGCTTTGCTTCAAGAGAATCAATTATGAGAGAGGTTGTAGAGAAATTGAAGGGCGATGAGTTCCACAGGATAAGTGTTTGTGGGATGGGTGGTGTGGGTAAAACCACATTAGTGAAAGAGCTTATCAAAATTTTACAAGCAGATAAGGTGTTTGATGAAATATCAATGGCTGTAGTGTCCCAGGTTCCTGACTATAGAAAGATTCAAGGTCAAATTGGTGATACCTTAGGCTTGAAATTTGACAAGGAAACTCTGCAAGGAAGGGCGTGTCAACTGTTTGAGAGGCTTAACAAGATCAATAAGGTCCTCCTGGTGCTGGATGATGTATGGACAGAGCTGGATTTCGAGTCCATCGGGCTTCCTTCAAATGAGCAATGTCACAAAGGCTGCAAAATTTTATTCACCTCAAGAAATGAAGATGTGTGCCACAGGATGAGAATTCAAAGGAACTTTGCTATCCCAGTTCTGTCTAAAGAAGAAGCATGGGATCTCTTCAGGGATACAGTAGGTGGTCATGTTGTGGACAAAGCTGAGATCCATAACATAGCAAAAGAGGTTGCAAATGAATGTGGGGGTTTGCCAATTGCTATTGTCACAATAGGAAAAGCACTAGGAAACAGGGAGAAGCATGCATGGGAGGATGCACTTGATCAGCTGAGAAAGTCTTCACTAACTTCCTTCTCAGAGATGCAAGAATATTCTATATATTCATGTATCGAATTAAGCTATAACTTTCTAGGCAACGAAGAAGCTAAATTTCTCCTTTTGCTTTGTTGCTCATTTCCAGAAGACTTTGACATTCCTATTGAAGTTCTACTCAGATATGGAGTAGGCTTGGGTTTGTTTAAGGATCTAGGTGCTTTGTATAAAGCAAGAAATCGAGTGCATACCTTGGTTGATACTCTAAAGAAGCGGTTTTTGTTGTTGGACAGCAATGAGGATGAGTGTGTGAAGATGCATGATGTTGTTCGTGATACTGTCATAACAATTGCATCCAAAGAAGAGCATGGATTTGCAGTGAAATGTGATGCTGGACAGAAGAGGTTAAAGGAGTTCACATGGCATCATAGTGCAATCTCATTCGTGTTTGATGAGGTTAAGTTGCATCCTATGAGTTTGCAGTGTCCAAACCTTAGACTTTTACAAGTTTTCTTAAAGAGAAGAGAACCCATTTCAGAAAATTTCTTCCATAACATGAGCAAGCTAACGGTTTTAGGCATAAGCAATCTGTGCATTCCATCAATGTCATCTCCATTTCGATCACTCAACAACCTCTGCACCTTACGGTTAGAAGATTGTCACGTCGGAGACATATCGGTAATCTGTAAGGAGCTAAGTAAACTGGAAGTGTTAAGCTTTGCCCACTCAAATATCAAAGAATTGCCTGTAGAAATTGGCAAACTTAGCCTTCTAAGACTGTTGGATTTGACAGAATGCAATGATCTTCGTCAGATGTCTTCTGGGGTCCTAACTAGCTTATCTAACTTAGAAGAACTTTATCTTAGAGTCAGGAATTTTCATTGCGTGGAAAAGAATTCCATTCTTGCGGAGCTCAAATCTCTTTCTCATCAGCTAAAAGTTCTAGAGATTTCAATTACAGGAATTCATGTTTTTCCAAAAGATTTGGAATTCAAAAACTTGGTCAAGTTCTGGATCTATGTGAGAGACCCTACTACTCTTTCTCATGGCCTTGTTCGTCGGGGATATCTACACCCTAGCATCCTTAAATTAGACAGCTTGTACTATAAGGACATTAAAGAGAATGTGGCGATTCAACAGTTGCTTAAGAAATCTGAAATTCTCAACCTTGGAAATGTGAAACAATTAGAAAACGTGCTCTATGAGTTGGATGAAGAAGGTTTTCGACACTTAAAAAATCTCAGCATTGAATTCTGCAATGATCTGAAGTATTTAACAGATAAAAGTGTCTATGCTTCAAGTTGTGTCTTCCCACTGCTTCAGTCATTGTCTCTGCACAATTTGGACAATTTAAGAGAGATATGCCATGCCAAGAGTTTCATCTCAAACTCTTGCCAATGCTTTGGCAGCTTGAGAGATCTGAAAGTAGAATTCTGCAACAAGTTGAAGTATGTCTTTTCACCATCTCTGGGGTCAAGTGTTAGAATGCTTCAAGGCTTGCATGTAACTGAATGCTATGAGCTTCAATGTATTATCTCCAAAGAAATCCATGACGAGAATTCAGTGATGAAGTTCACAAATTTAGTGGAACTGAAGCTACACGAACTCCCTGGCCTTGTTGGGTTCGCTATACCAGATCATAAGAATGATCTTCATCTACTAAAGTCTCAGGTTCATGAAGAACAGAATCTTGGTAATGGCCAACATCTGCTAGGGTTCAACTCAACACTAGGAGCTACCGATGAATCTGTTCACATTGGTGGTACACTCTTTGAATCCAAATGGATGCTCCAGTTCCCAAAATTGGAGAAAATCTTATTACTTGAGTGCTCTTTGTTAGATACTGTCTTTGACTTGAAACAGCCAGAAATGGAAGACCAGCCAGTTTCTATGTTATTTTCTCAACTCAAAGAAATAGAGATATCTTGGCTTAGCAAGCTAAGACAAATTTGGAGTAATGTTCCAAGTTATATTGAAGGCTTTCAGAACTTGAGATCACTCAAAGTTAAGAAATGTGATGCTTTAAGAAGTGTCTTCATTCCCGCCATTGCCAGAACACTCACACAGCTTCAGAAGCTGGTGATACACAGTTGCCAACTGATGGAGAAAGTTGTTGGGGATGATGATGATGATGGAGGAGAACAGGAGAAAGTGGAAACTCTTTTGTTTGCCAAGTTAGATTCTTTGACACTTAAGGATCTCCCAAGACTTGTGAGCATTTGTCCAGATTGTTATGAACTAGCCTGGCCATCTCTGAGATATTTATGCATTGAAGGATGTCCCCAGCTGAAGATATCTTCAATGCCAATTCAAAAACTACCAAAACAAGATAATCTCAGTAACTCCTTTTCTGATTCTACCTTCCAGGATATTGGTTCCGGCACTCGCAGGTTTCTCTCTTGTTGCATCGGATTCACCCCATCAAACATCGAGATTTCTAATTCAATGACTAAATCAAATTTCCAAAGAGCAGGAAAGATTAGCAACCAGGCTAGTTTGATGAGAGACCACATCTCTTTTGATGTCAAGGAATTATATACTAGCGAAGAAATGAGGTCCTGCATGCCAAATCTGGAACAACTTCAAGTCAAAGGCTGGGATTCACTAGATGTCATGTTCCAGCTTGAACAAAACCATCCTTCCAATTCCAATGCTAGTGTAAACTGTATAGTAAAACTGGAGCCCATGCTAATAAGTCCAATGAAAATCACCAGCTTCAACAACCTCACGCTGCTAAACTTAGAAGCTTGTCACAATTTAAGATATCTGTTCTCTCATTCCATAGCAAAGCTCCTTGTGAAATTGCAAGATGTGAAGATATCAAACTGTAGGATGGTGGAGCAACTAGTTAAAAGTGAAGAAGATGGCTCAGCTGTATTTTCTCATCATGCAAGCTCTAATGAAGTTTTTGAGAATGCATTACCAAGTTATTCAACATCCAACTCCAAAGAATCATTTGTGTTAGAGTTCCCATCCCTAAAGAGAATTAGCATTGTTAATTGCAGCATGCTAGATGTTCTCATCAAGAGTGGACGAGAGTGGAGAGCAGACGTGACTTCATTTGGTCAAGTACAATCTCTTACTTTAAGCCACCTACCAAATCTTGTGAGTTTATGCTACCAACCATGTATTCTTGAACAACCATCTTCAGACAAATGCACATCCAACATCCATCATCAACAAGATCAGGTTGGATATGATGAACAGAGAATGATACTGAATGGTCCTTTTATAAACTGCTTTCGGTTTTCACATCTAACATACTTTGTGATAAAGGAATGCACAAGAATTAGCTTTTTGTTCTCCCCATCATCCTCTGCAAGTCTTGTGCATCTGCAAGAACTAGACATATGTGATTGTGAGAACATAAAGGAAATAGTATCATCAAAAGAAGAGATTCAGGCAAGTTTTTTCAAGATTGTGTTCCCCAGATTGCGGCGTCTAAAACTTGAACGCCTGTTCAACCTTGAAGCCTTCTGTCATGGTTCCTACGATTTGGATTTCCCATTACTGCAAGAAGTGTGTTTTGGAAATTGCCGTAAGATGGAGATATTCTCAAATGGATTTTCAAACACCCCAAAGCTACAAGGTATTACCATGAAAGTTGGAAACCTTACTAAGATCATATGGATGGGAGATCTGAACACCACTGCCCAACTTTCCAGGGGAATTTTAGCTTTTCAAACATCTGAGACACTTGGGTGGCTCAAGCAGGAACAAGGCATGCTAAGATACTTAATGAAAGAAACAGAGATGACTGTTGAAAGCTTTCAAAGTTTACTGACTCTTGTCCCATCCAATGTGATACACTCGTTTCAGAATCTGAAGAACCTCACAGTAAAAGACTGTGGTTCACTGATTGAAGTGTTTGAATCAGAAGGAGAAAACAAAAAGAGGCATAGCATAATACACTATGAGCTAGAAGTCATGAACTTGCAATTTCTACCTAAGTTGATTCACATATGGAAAAATCATGAAGAGATTCTGGATTTCCAGAAGCTAAAAGTATTGAAGATTGAATACTGTGGCAATTTGAAGGGTATATTGTCACCTTCTATGGCCAAAAGTCTTGTCCAACTACAGCACCTTCGCGTATATAGTTGTCAGATGATGGAGGAGATAGTCATGAAGGAAGCTGAAGAAGAAGAAAATGAAGGAGCAAATAAAGCTGAGATATTATTGTTTCCATTGCTGAATAAGTTGGAGCTTCGTCATCTTCCCAACCTCAAATATTTTTGCTCAAAAAGTTTAGACTTTGAACTTCCATTCTGTGAAGAAATGGTAATTGAAAAATGTCCTAAGATGACAACCTTTTCCTGTGGAGCTGTAAGCACACCAAAGCTTCCTAATATATATAAAGGATCCTATGAGTATGTAGACATCATGGGAGACCTTAATTTGACAATCTATCAAGCTCATTCAGGAGATTTGAAGTCAGCACTTCAAAGATCAGAGACAATCAATTGGATTGAGCAAGATGAAATCCTACTTGGCTACTTAACAAGAGTAACAGAACTGGTTGTTGAAGGTTGTGAAAAGCTGTTGAACTGTGTTCCATCCAACATGCTACATAGACTGCAACATTTGAAACAGCTCAAGGTCCGAGAATGTTGCTCACTGGTTGAGATATTTGAATCAGAAGGAGTAGCAGAAGCAAATGAAGATGAAGAGCATGCTGATGCCACGACACTATATGAATATAATCTCCAAGAAATAAATTTGTACTCTCTACCAAAACTAATGCACATATGGAAAAATCATGGTGAAGTAGTCTTAGGATTTCAGAATCTTAAAAAGCTAAACATTGGTTGCTGCGATGGTTTAAGTAGTGTGTTCCCTCCTTCCATAGCCAGGACCCTTGTGCTACTGCAAGAGCTATCAGTTTATGAATGTGAGAAGATAGAGGAGATGGTCACAAAAGAGGAAGAAGCAGAGTTCAACAAGGCCAATAACAAGAATATTGTATTCCCAGAATTGAGGTGGCTGACACTTTATCGTCTTCCCAATCTTAAATGTTTCTGCTCCAGTAATTACCAGTTTGAGATGCCATCTTGTAGGGACGTAACTATTAAGGATTGCTCAAAAATGGAGACTTGTTGTTATGCAACCATGAGCGCTCTGTGA 6231 0.3924 MEFLVAIGTGIVSKLGEMLVDPVTSQVKHMIHCDKNINQMKNELNNLEDRKLAIEGMVDVDRRNGRCIAQNVEYWLDQVDSITENESLKVYDDELVNMNKKCLNGLCPNLVFRYSLSKKARKITQDLVSLKEQKFELISYPAPLPTLGSTFKEGIKSFASRESIMREVVEKLKGDEFHRISVCGMGGVGKTTLVKELIKILQADKVFDEISMAVVSQVPDYRKIQGQIGDTLGLKFDKETLQGRACQLFERLNKINKVLLVLDDVWTELDFESIGLPSNEQCHKGCKILFTSRNEDVCHRMRIQRNFAIPVLSKEEAWDLFRDTVGGHVVDKAEIHNIAKEVANECGGLPIAIVTIGKALGNREKHAWEDALDQLRKSSLTSFSEMQEYSIYSCIELSYNFLGNEEAKFLLLLCCSFPEDFDIPIEVLLRYGVGLGLFKDLGALYKARNRVHTLVDTLKKRFLLLDSNEDECVKMHDVVRDTVITIASKEEHGFAVKCDAGQKRLKEFTWHHSAISFVFDEVKLHPMSLQCPNLRLLQVFLKRREPISENFFHNMSKLTVLGISNLCIPSMSSPFRSLNNLCTLRLEDCHVGDISVICKELSKLEVLSFAHSNIKELPVEIGKLSLLRLLDLTECNDLRQMSSGVLTSLSNLEELYLRVRNFHCVEKNSILAELKSLSHQLKVLEISITGIHVFPKDLEFKNLVKFWIYVRDPTTLSHGLVRRGYLHPSILKLDSLYYKDIKENVAIQQLLKKSEILNLGNVKQLENVLYELDEEGFRHLKNLSIEFCNDLKYLTDKSVYASSCVFPLLQSLSLHNLDNLREICHAKSFISNSCQCFGSLRDLKVEFCNKLKYVFSPSLGSSVRMLQGLHVTECYELQCIISKEIHDENSVMKFTNLVELKLHELPGLVGFAIPDHKNDLHLLKSQVHEEQNLGNGQHLLGFNSTLGATDESVHIGGTLFESKWMLQFPKLEKILLLECSLLDTVFDLKQPEMEDQPVSMLFSQLKEIEISWLSKLRQIWSNVPSYIEGFQNLRSLKVKKCDALRSVFIPAIARTLTQLQKLVIHSCQLMEKVVGDDDDDGGEQEKVETLLFAKLDSLTLKDLPRLVSICPDCYELAWPSLRYLCIEGCPQLKISSMPIQKLPKQDNLSNSFSDSTFQDIGSGTRRFLSCCIGFTPSNIEISNSMTKSNFQRAGKISNQASLMRDHISFDVKELYTSEEMRSCMPNLEQLQVKGWDSLDVMFQLEQNHPSNSNASVNCIVKLEPMLISPMKITSFNNLTLLNLEACHNLRYLFSHSIAKLLVKLQDVKISNCRMVEQLVKSEEDGSAVFSHHASSNEVFENALPSYSTSNSKESFVLEFPSLKRISIVNCSMLDVLIKSGREWRADVTSFGQVQSLTLSHLPNLVSLCYQPCILEQPSSDKCTSNIHHQQDQVGYDEQRMILNGPFINCFRFSHLTYFVIKECTRISFLFSPSSSASLVHLQELDICDCENIKEIVSSKEEIQASFFKIVFPRLRRLKLERLFNLEAFCHGSYDLDFPLLQEVCFGNCRKMEIFSNGFSNTPKLQGITMKVGNLTKIIWMGDLNTTAQLSRGILAFQTSETLGWLKQEQGMLRYLMKETEMTVESFQSLLTLVPSNVIHSFQNLKNLTVKDCGSLIEVFESEGENKKRHSIIHYELEVMNLQFLPKLIHIWKNHEEILDFQKLKVLKIEYCGNLKGILSPSMAKSLVQLQHLRVYSCQMMEEIVMKEAEEEENEGANKAEILLFPLLNKLELRHLPNLKYFCSKSLDFELPFCEEMVIEKCPKMTTFSCGAVSTPKLPNIYKGSYEYVDIMGDLNLTIYQAHSGDLKSALQRSETINWIEQDEILLGYLTRVTELVVEGCEKLLNCVPSNMLHRLQHLKQLKVRECCSLVEIFESEGVAEANEDEEHADATTLYEYNLQEINLYSLPKLMHIWKNHGEVVLGFQNLKKLNIGCCDGLSSVFPPSIARTLVLLQELSVYECEKIEEMVTKEEEAEFNKANNKNIVFPELRWLTLYRLPNLKCFCSSNYQFEMPSCRDVTIKDCSKMETCCYATMSAL 2076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01309 2076 Pfam NB-ARC domain 162 400 IPR002182 GO:0043531
Accr1g01309 2076 Gene3D - 312 397 IPR042197 -
Accr1g01309 2076 Gene3D - 398 485 IPR036388 -
Accr1g01309 2076 SUPERFAMILY L domain-like 474 1135 - -
Accr1g01309 2076 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 411 IPR027417 -
Accr1g01309 2076 Gene3D - 147 307 IPR027417 -
Accr1g01309 2076 PRINTS Disease resistance protein signature 179 194 - -
Accr1g01309 2076 PRINTS Disease resistance protein signature 252 266 - -
Accr1g01309 2076 PRINTS Disease resistance protein signature 622 638 - -
Accr1g01309 2076 PRINTS Disease resistance protein signature 346 360 - -
Accr1g01309 2076 Gene3D Ribonuclease Inhibitor 958 1191 IPR032675 -
Accr1g01309 2076 Coils Coil 30 57 - -
Accr1g01309 2076 Gene3D Ribonuclease Inhibitor 1206 1440 IPR032675 -
Accr1g01309 2076 SUPERFAMILY RNI-like 1448 1746 - -
Accr1g01309 2076 Gene3D Ribonuclease Inhibitor 522 926 IPR032675 -
Accr1g01309 2076 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 938 1136 - -
Accr1g01309 2076 SUPERFAMILY RNI-like 1684 2045 - -
Accr1g01309 2076 Gene3D Ribonuclease Inhibitor 1619 1821 IPR032675 -
Accr1g01309 2076 Gene3D Ribonuclease Inhibitor 1856 2073 IPR032675 -
Accr1g01309 2076 Gene3D Ribonuclease Inhibitor 1442 1576 IPR032675 -
Accr1g01309 2076 SMART AAA_5 176 322 IPR003593 GO:0016887
Accr1g01309 2076 FunFam Probable disease resistance protein At1g61300 149 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01309 Accr-Chr1 39543895 39554863 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01309 180 521 WRKY Transcription Factor Family AT5G45050 25.070 2.36e-11 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01309 - - vra:106757704 2073.13